CK938651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.406e-65 Identity = 118/145 (81.38%), Postives = 133/145 (91.72%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAG++K+ +QLD EVHRKYI+GGHVAAYMRTLMEDEPEKYQSHF EY+K+GIEAD LE LYKKVHAAIRA+P KKS+K P HKRYNLKKLTY+ERKARLVERL ALN+A Sbjct: 146 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA 290
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 8.557e-63 Identity = 111/145 (76.55%), Postives = 130/145 (89.66%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++HRKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 147 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.118e-62 Identity = 111/145 (76.55%), Postives = 130/145 (89.66%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++HRKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 147 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.118e-62 Identity = 111/145 (76.55%), Postives = 130/145 (89.66%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++HRKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 147 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 236.498 bits (602), Expect = 9.461e-62 Identity = 108/145 (74.48%), Postives = 130/145 (89.66%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF K++KQLDAE+HR YIYGGHV+ YM+ L EDEPEK Q+HF Y+K+G+EA+++EE+YKKVHAAIRA+PN KK+EK P HKRYNLKKLTYEERK +L+ER+KALN A Sbjct: 146 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.108e-61 Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 DVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF K++KQLDAE+HR YIYGGHV+ YM+ L EDEPEK Q+HF Y+K+G+EA+++EELYKKVHAAIRADPN KK+ K P HKRYNLKKLTYEERK +L+ER+KALN A Sbjct: 146 DVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 290
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.621e-45 Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 115 SKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKALNAA 438 SKDSKQLDAEVHRKYIYGGHVAAYM LMEDEPEKYQSHF Y+K + DN+EE+YKKVHAAIR DP+ KKS+K+PP HKRYNLKKLTYEERKA+L+ERL ALNAA Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAA 109
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 76/141 (53.90%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKA 426 D GL++TTTG R+FGA+KG++DGGL+IPHS KRF G+ +SK +A+VHR++I+ H+A YM+TL E+EPE +Q F +Y+K GI AD +EE+YKK H AIRADP++ + K KR+N KLT ERK R V+++KA Sbjct: 147 DTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.598e-39 Identity = 75/139 (53.96%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSE-KKPPAGHKRYNLKKLTYEERKARLVER 417 DVGL +TTTG RVFGA+KG++DGGL++PHS KRF G+ +SK+ +AEVHR +I+G HVA YMR+L +D+ + ++ F +Y+K G+ AD +E +YKK H AIRADP+ KK E KK KR+N +KLT ERK R+ ++ Sbjct: 147 DVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 285
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.920e-38 Identity = 76/136 (55.88%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPA-GHKRYNLKKLTYEERKARL 408 DVGL +TTTG RVFGA+KG++DGGL+IPHS KRF G+S ++K +A+VHR +I+G HVA YMR+L E++ E ++ F Y+K GI AD+LE++YKK H AIR DP K + KK A KR+N KKLT E+RK ++ Sbjct: 147 DVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282 The following BLAST results are available for this feature:
BLAST of CK938651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938651 ID=CK938651; Name=CK938651; organism=Citrus sinensis; type=EST; length=663bpback to top |