CN187791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187791 vs. ExPASy Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.287e-46 Identity = 106/181 (58.56%), Postives = 124/181 (68.51%), Query Frame = -3 Query: 232 PNNDVAEEKAVAQ------LHDQEKPVDDSKALAVVD-QTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 753 P VA+EKA+ ++EKP DDSKAL VV+ + P+ DRD LA V EKR S IKAWEESEK+KAENKAQKK+SA+ AWEN EEQLE+KKAEY EKMKNK+AL+HKEAEEKRAM+EA+RGED+LKAEE+AAKYRATGT PKK+LG F Sbjct: 25 PKEVVADEKAIVAPALPPPAEEKEKP-DDSKALVVVETKAPEPADEKKEGSI------DRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198
BLAST of CN187791 vs. ExPASy Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.054e-44 Identity = 100/171 (58.48%), Postives = 118/171 (69.01%), Query Frame = -3 Query: 232 DVAEEKAVAQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 744 DVAEEK Q E+ DDSKAL VV++ + DRDV LA++ KEKR SF++AWEESEK+KAENKA+KK++ V AWEN EEQLE+KKAEYAE+MKNKVA +HKEAEE+RAM+EA+RGEDVLKAEE AAKYRATG PK GCF Sbjct: 48 DVAEEKI--QNPPPEQIFDDSKALTVVEKPVEEPAPAKPASASL----DRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212
BLAST of CN187791 vs. ExPASy Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.626e-41 Identity = 95/171 (55.56%), Postives = 118/171 (69.01%), Query Frame = -3 Query: 232 DVAEEKAVAQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENXXXXXXXXXXXXXEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 744 +VA+EK +H+ P +SKALAVV++ + DRDV LA++EKEK+ SFIKAWEESEK+KAEN+AQKK+S V AWEN EE+LE+KKA+Y EKMKNKVA +HK AEEKRAMVEA++GE++LKAEE+ AKYRATG PK GCF Sbjct: 30 EVADEK----IHNP--PPVESKALAVVEKPIEEHTPKKASSGSA----DRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190 The following BLAST results are available for this feature:
BLAST of CN187791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187791 ID=CN187791; Name=CN187791; organism=Citrus sinensis; type=EST; length=836bpback to top |