FC921794

Overview
NameFC921794
Unique NameFC921794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length248
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13555 contig Csv1_Contig13555:123..370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.973e-15
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1
Query:   10 RRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            R  L LPPGPKPWPI+GNL  +GP P++S  A+++ YGP+M LK             +A  FLKTHDA FS RP
Sbjct:   28 RYPLPLPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRP 101          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query:   22 NLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            +LPPGP  WPI+G L L+G +P+ S+  ++ KYGPIM LK            + A AFLKTHDA FS RP
Sbjct:   37 HLPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRP 106          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.017e-12
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 1
Query:   25 LPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            LPPGP PWPI+GNL  +G  P+R++ A+   YGPI+ L+             +AE FLK HDA F+ RP
Sbjct:   33 LPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRP 101          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.940e-12
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1
Query:   10 RRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            +R   LPPGP PWPI+GN + +    +R++  L+EKYGPI+ L+            E A+ FLKTHD +F+ RP  + G
Sbjct:   37 QRNERLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVG 115          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1
Query:    4 GGRRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            G  R   LPPGP+ WP++G L L+G +P+ ++  +++KYGPIM LK              A+AFLKT D  FS RP P AG
Sbjct:   29 GSWRRRRLPPGPEGWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRP-PNAG 108          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.777e-12
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 1
Query:   22 NLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            NLPP PK  PI+G+L+L+ P+P++  + LS ++GPIMQL             E A+ FLKTH+  FS RP
Sbjct:   28 NLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP 97          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   13 RELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            R   LPPGP  WP++G L L+G +P+ ++  +++KYGP+M LK            E A+AFLKT D  FS RP P AG
Sbjct:   33 RRHRLPPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRP-PNAG 109          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query:   10 RRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPK 234
            R + NLPP P  +P++GNL+ IG LP+RS+  L+E+YGP+M L             E AE  L+THD     RPK
Sbjct:   25 RSKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPK 99          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1
Query:    7 GRRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            GRR   LPPGP+ WP++G L L+G +P+ S+  +++KYG IM LK            + A+AFLKT D  FS RP P AG
Sbjct:   30 GRR---LPPGPRGWPVIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRP-PNAG 105          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query:   13 RELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            R+  LPP PK  PI+G+L+L+ P+P++  + LS ++GPIMQL             E A+ FLKTH+  FS RP
Sbjct:   25 RKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP 97          
The following BLAST results are available for this feature:
BLAST of FC921794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
F3PH_PETHY4.973e-1551.35Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C75A6_CAMME1.037e-1250.00Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
F3PH_ARATH3.017e-1246.38Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A1_PINTA3.940e-1241.77Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C75A2_SOLME6.721e-1244.44Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C93A1_SOYBN8.777e-1245.71Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C75A7_EUSGR1.955e-1144.87Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BJ_ARATH1.955e-1144.00Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY2.554e-1146.25Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C93A2_SOYBN3.335e-1143.84Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06052D10T7 RindPdigS Citrus sinensis cDNA clone C06052D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921794 ID=FC921794; Name=FC921794; organism=Citrus sinensis; type=EST; length=248bp
CGCGGGGGCCGCCGGGAACTCAACTTACCGCCTGGCCCAAAGCCATGGCC
GATCGTCGGAAACCTCAACCTCATAGGCCCACTTCCCTATCGGTCCATCC
ATGCTCTGTCCGAAAAATATGGGCCTATCATGCAACTCAAATTCGGATCA
TTCCCCGTTGTTGTGGGATCTTCCGTTGAGATGGCGGAGGCTTTCCTTAA
AACCCACGACGCTCTGTTTTCTTACCGGCCCAAACCGGCCGCAGGTAA
back to top