CK938581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.402e-27 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 234 GK SKR F+R +I+E+AG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GGG EKKK Sbjct: 34 GKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.185e-26 Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 234 GK SKR F+R +I+E+AG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ G G EKKK Sbjct: 30 GKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.727e-26 Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGG---GEKK 231 GK SKR F+R +IRE+AG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GG EKK Sbjct: 34 GKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.610e-21 Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGE 225 G S+RV +R V+RE+AG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ LRK +A GE Sbjct: 28 GFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_ICTPU (60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.322e-18 Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 1 GGKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 210 GG+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN A+RK+ A Sbjct: 30 GGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNILAAMRKAAA 102
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_LAPHA (60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_HUMAN (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98 The following BLAST results are available for this feature:
BLAST of CK938581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938581 ID=CK938581; Name=CK938581; organism=Citrus sinensis; type=EST; length=298bpback to top |