EY649595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 297 ++ KR IP+ + KT K+FVGG+P E+EF++FF QFG V + +M D T R RGFGF+T++ E AV+ +++ + + G VEVK+A PK Sbjct: 232 IDPKRAIPR----EEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ-PYITIHGKPVEVKRATPK 325 HSP 2 Score: 71.2478 bits (173), Expect = 7.299e-12 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 61 KIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 300 K+F+GG+ +D +D+F QFGEV + +MRD +T RSRGFGF+TF + V+++++K + L+ G ++ K+A P++ Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLD--GKIIDPKRAIPRE 241
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14 Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 297 ++ KR IP+ + KT KIFVGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + + ++ ++E+K+AEP+ Sbjct: 228 IDPKRAIPR----DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPR 321
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: SQD_DROME (RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 61 KIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 306 KIFVGG+ + ++++E K +F QFG + E ++ D S+ +GF FITFD+EQ V DLL K K ++AG +V+VK+A PK N Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAGKEVDVKRATPKPEN 217
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 312 V+ K P+ A +TKKIFVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + + E+ VE KKA+PK+ LP Sbjct: 99 VDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIHFHEINNKMVECKKAQPKEVMLP 201 HSP 2 Score: 69.707 bits (169), Expect = 2.124e-11 Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 61 KIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 300 K+F+GG+ + + +D+F ++G++ E +M+D +T RSRGFGF+TF +VD +L +G EL G +V+ K A P++ Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTH-ELDGKKVDPKVAFPRR 108
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP 348 ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V+ + + + E+ VE KKA+PK+ P S R + P Sbjct: 90 IDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMP 204
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 312 ++ K P+ A +TKKIFVGG+ ++ ++ K +F QFG+V++ +M D +T+R RGFGF+TF+ E V+ + + + E+ VE KKA+PK+ P Sbjct: 91 IDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMVECKKAQPKEVMFP 193 HSP 2 Score: 69.3218 bits (168), Expect = 2.774e-11 Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 28 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 300 G+ K+F+GG+ + D +D+F +FGE++E +MRD +T RSRGFGF+TF +VD +L + + EL ++ K A P++ Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVAFPRR 100
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 312 ++ K P+ A +TKKIFVGG+ ++ ++ K +F QFG+V++ +M D +T+R RGFGF+TF+ E V+ + + + E+ VE KKA+PK+ P Sbjct: 91 IDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMVECKKAQPKEVMFP 193 HSP 2 Score: 69.3218 bits (168), Expect = 2.774e-11 Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 28 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 300 G+ K+F+GG+ + D +D+F +FGE++E +MRD +T RSRGFGF+TF +VD +L + + EL ++ K A P++ Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVAFPRR 100
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP 348 ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V+ + + + E+ VE KKA+PK+ P S R + P Sbjct: 90 IDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMP 204
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 1 VEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP 348 ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V+ + + + E+ VE KKA+PK+ P S R + P Sbjct: 90 IDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMP 204
BLAST of EY649595 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 40 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 318 S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+ EQ+VD + + ++ G +VEVK+AEP+ P Sbjct: 107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKRAEPRDSKSQAP 198 The following BLAST results are available for this feature:
BLAST of EY649595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649595 ID=EY649595; Name=EY649595; organism=Citrus sinensis; type=EST; length=799bpback to top |