CK938558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938558 vs. ExPASy Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 2.623e-46 Identity = 100/162 (61.73%), Postives = 117/162 (72.22%), Query Frame = 1 Query: 4 AISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRARQVDVSKESRGTDGRRXXXXXXXXXXXXXXXXXXXXXXXXGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPYISDDLELECKGKDKYKCGSNVFWKW 477 AI+GS GS ELN K+ V++ G K MPVI+A++V V + G++GRR GVIDEYLERSK NKELND+KRLATSGANFARA+TVQFG+CKFPENFTGCQDLAKQKKVP+IS+D+ LEC+GKDKYKCGSNVFWKW Sbjct: 14 AIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVDGSNGRRSAMVFLAATLFSTAAVSASANA--GVIDEYLERSKTNKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
BLAST of CK938558 vs. ExPASy Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.067e-39 Identity = 71/84 (84.52%), Postives = 82/84 (97.62%), Query Frame = 1 Query: 226 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPYISDDLELECKGKDKYKCGSNVFWKW 477 + DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKVP+ISDDLE+EC+GK+K+KCGSNVFWKW Sbjct: 29 IFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112
BLAST of CK938558 vs. ExPASy Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39 Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 226 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPYISDDLELECKGKDKYKCGSNVFWKW 477 V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+CKFP NFTGCQDLAKQKKVP+I+DDLE+EC+GK+K+KCGSNVFWKW Sbjct: 62 VFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
BLAST of CK938558 vs. ExPASy Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21 Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 223 GVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPYISDDLELECKGKDKYKCGS 459 GV+++ L +S ANK LN++KRLATS AN AR+ TV GTC+FPENF GC++LA K V YI++DL++EC+GKD CGS Sbjct: 54 GVVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132 The following BLAST results are available for this feature:
BLAST of CK938558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938558 ID=CK938558; Name=CK938558; organism=Citrus sinensis; type=EST; length=591bpback to top |