CK938519

Overview
NameCK938519
Unique NameCK938519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK938519 vs. ExPASy Swiss-Prot
Match: MGAT1_ARATH (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Arabidopsis thaliana GN=GNTI PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.895e-27
Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 1 
Query:   10 IVKKATPVHGENVVLKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDDIPRTAYKGVVVFRYQTPRRIFLVGPDSLRQLGIKD 264
            +V++A P+ G ++VLKA +I+ DVRI YKDQ  FE IA +FGIF EWKD +PRTAYKGVVVFR QT RR+FLVGPDS+ QLGI++
Sbjct:  359 LVRQARPIQGSDLVLKAQNIKDDVRIRYKDQVEFERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFLVGPDSVMQLGIRN 443
The following BLAST results are available for this feature:
BLAST of CK938519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MGAT1_ARATH6.895e-2765.88Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004441_G10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938519 ID=CK938519; Name=CK938519; organism=Citrus sinensis; type=EST; length=631bp
GGGGCCGAAATTGTGAAAAAAGCTACACCTGTGCATGGAGAGAATGTTGT
TCTTAAGGCACATGATATAGAAGGTGATGTGCGTATTGAATACAAAGACC
AGTCGCACTTTGAAATCATCGCACGTCAATTCGGAATTTTTAACGAATGG
AAGGATGATATACCAAGGACAGCATACAAAGGAGTAGTTGTTTTCCGTTA
CCAAACACCTCGGCGTATATTTCTTGTTGGTCCTGATTCTCTGAGGCAGC
TTGGGATCAAAGATCGTTGATATAGAAAAGTAACAATAAGAGAATAGGAC
GAGAAAATACATTCTTGCTAATCAGTGAGGTTCTGGCCAAAGAATTGTTT
ACTGAAGCTGGAGGGCATGCTAACATGTTAAACAAATACAATTAAGCGAA
AGGAGCTGGCGCGCTAGTTGCGGTCCAAATTTTCTGTCCACTATATGAAC
TTTTACCTTGTAGAGTAGAAGATACCATACTTTCTTGCTGTCGAAGTCGG
CAATATTGCCCATGCAAGCCAGTAAGCAGGTGATAATGCAAATGCGACAG
AAGAAACCATGAAGTTTTAATCTGATTCTTTTTGTTTTGATTAAGGGGCA
TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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