CK938503

Overview
NameCK938503
Unique NameCK938503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9634 contig Csv1_Contig9634:12..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 3.609e-87
Identity = 156/190 (82.11%), Postives = 175/190 (92.11%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 645
            M+T ++KIQKDK  EPTEFE+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA+++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV RPR+RTLTAVHD +LEDVVYPAEIVGKRVR  LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GKDVVFDYP+T+
Sbjct:    1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYPMTE 190          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.371e-86
Identity = 154/190 (81.05%), Postives = 179/190 (94.21%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 645
            M+T  +KI KDKDAEPTEFEE VAQALFD ENTNQE+KSDLKDLYIN A+Q+DVSG +KA+V++VPYRLRK++RKIH RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAVQRPRSRTLTAVHDAMLED+VYPAEIVGKRVR RLDGSKI+K+FLDPK +N+TE KLE+F+GVYRKL+GKDVVF++P+T+
Sbjct:    1 MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGKDVVFEFPLTE 190          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.586e-85
Identity = 149/190 (78.42%), Postives = 173/190 (91.05%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 645
            MF+ + KI KDK   PTEFEE VAQA FDLENTNQELKSDLKDLYINQA+ MD++GNRKA+V+YVP+RLRKA+RKIHSRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH+AMLEDV YPAEIVGKR R R+DG+KI+K++L+PKERNNTEYKLE+  GVYRKLTGKDVVF+YP+ D
Sbjct:    1 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGKDVVFEYPVAD 190          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.761e-85
Identity = 152/190 (80.00%), Postives = 174/190 (91.58%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 645
            M+T +KKIQKDK  EP+EFE+TVAQA FDLEN NQELKSD+KDLYIN A QMDV+GNRKA+V++VPYRLRK +RKIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV RPR+RTLTAVHD +LEDVVYPAEIVGKRVR RLDGSKIIKIFLDP ERNNTEYKL++F+ VYR+L GKDVV++YP+ +
Sbjct:    1 MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGKDVVYEYPVAE 190          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.676e-84
Identity = 149/188 (79.26%), Postives = 174/188 (92.55%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI 639
            MF+ + KI+KDK+AEPTE EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQRPR+RTLT+VH+AMLEDV +PAEIVGKR R RLDGSKI+K+FLD KE+NNTEYKLE+  GVYRKLTGKDVVF+YP+
Sbjct:    1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLTSVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYPV 188          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.370e-84
Identity = 153/190 (80.53%), Postives = 173/190 (91.05%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 645
            M+T +KKIQKDK  EP+EFE+TVAQA FDLEN NQELKSDLKDLYIN AIQMDV GNRKA+V++VPYRLRK +RKIH RLVRELE+  SGKDVV +ATRRIVRPPKKGSAVQRPR+RTLTAVHD +LEDVVYPAEIVGKRVR RLDG+K+IKI+LDPKERNNTEYKLE+FS VYR+L GKDVVF+YP+ +
Sbjct:    1 MYTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGKDVVFEYPVAE 189          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.421e-83
Identity = 148/191 (77.49%), Postives = 173/191 (90.58%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 648
            M++ + KI KDK   PTEFEE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH+AMLEDV YPAEIVGKR R RLDG+KI+K+FLD K +N+TEYKLE+  GVYRKLTGKDVVF+YP+ +A
Sbjct:    1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYPVIEA 191          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.735e-81
Identity = 147/191 (76.96%), Postives = 173/191 (90.58%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 648
            MF+ + KI K+K  E +E +E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKAIVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA +RPR+RTLT+VH+A+L+DVV PAEIVGKR R RLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGKDVVF++PIT+A
Sbjct:    1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFPITEA 191          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 8.972e-54
Identity = 107/191 (56.02%), Postives = 145/191 (75.92%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 636
            MF+T  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V   RKAI+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRSRTLTAVHDA+LED+VYP+EIVG+R+R +LDGS++IK+ LD  ++NN E+K+E+FSGVY+KLTGKDVVF++P
Sbjct:    1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190          
BLAST of CK938503 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.172e-53
Identity = 107/191 (56.02%), Postives = 146/191 (76.44%), Query Frame = 1
Query:   76 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRCRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 636
            MF++  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G+RKAI+++VP    KA++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRSRTLTAVHDA+LED+VYP+EIVGKR+R +LD S++IK+ LD  ++NN E+K+E+F+GVY+KLTGKDVVF++P
Sbjct:    1 MFSSSAKIVKANGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEFP 190          
The following BLAST results are available for this feature:
BLAST of CK938503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
RS7_ORYSJ3.609e-8782.1140S ribosomal protein S7 OS=Oryza sativa subsp. ja... [more]
RS7_AVIMR1.371e-8681.0540S ribosomal protein S7 OS=Avicennia marina GN=RP... [more]
RS7_BRAOL2.586e-8578.4240S ribosomal protein S7 OS=Brassica oleracea GN=R... [more]
RS7_SECCE5.761e-8580.0040S ribosomal protein S7 OS=Secale cereale GN=RPS7... [more]
RS73_ARATH1.676e-8479.2640S ribosomal protein S7-3 OS=Arabidopsis thaliana... [more]
RS7_HORVU6.370e-8480.5340S ribosomal protein S7 OS=Hordeum vulgare GN=RPS... [more]
RS72_ARATH2.421e-8377.4940S ribosomal protein S7-2 OS=Arabidopsis thaliana... [more]
RS71_ARATH1.735e-8176.9640S ribosomal protein S7-1 OS=Arabidopsis thaliana... [more]
RS7_XENLA8.972e-5456.0240S ribosomal protein S7 OS=Xenopus laevis GN=rps7... [more]
RS7_ICTPU1.172e-5356.0240S ribosomal protein S7 OS=Ictalurus punctatus GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_B02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938503 ID=CK938503; Name=CK938503; organism=Citrus sinensis; type=EST; length=744bp
GGGGAGCAGCAGCTGCTCGTGTGTTTTTTTCTACTCGTGCATACAGATCT
AAAAGCTTCGCTGCGAGCTGTCAAGATGTTCACGACTAAAAAGAAAATCC
AAAAAGACAAGGATGCCGAACCTACTGAGTTTGAGGAGACAGTTGCCCAG
GCACTGTTTGATTTGGAGAATACCAACCAGGAGCTTAAAAGTGACTTGAA
AGATCTTTACATTAATCAAGCCATTCAAATGGATGTTTCTGGAAACCGCA
AGGCAATTGTTGTCTATGTGCCTTACAGATTGAGGAAGGCTTATCGGAAG
ATTCATTCTCGCCTTGTGAGAGAGCTGGAGAAGAAATTCAGTGGCAAGGA
TGTTGTACTCATTGCCACCCGAAGGATAGTCAGGCCACCAAAGAAAGGCT
CTGCTGTTCAGAGACCTCGCAGTCGCACACTCACAGCTGTTCATGATGCC
ATGCTTGAAGATGTAGTTTACCCAGCTGAGATTGTTGGAAAACGTGTCAG
ATGCCGTCTCGATGGATCCAAAATAATCAAGATTTTCTTGGATCCAAAGG
AGAGGAACAACACGGAGTACAAGTTGGAGTCTTTTTCAGGGGTTTACAGA
AAGCTTACCGGCAAAGACGTGGTTTTTGATTATCCAATTACAGATGCCTG
AAGAGTTGTTGCAGATGATCATTTGTGTTTGTCACTGTTTATTTTGTTGC
ACTATAATTTTGATTTGGATAGGGTACTATTTAAAATTTTGACT
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