FC921790

Overview
NameFC921790
Unique NameFC921790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length213
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = -2
Query:    3 VVSLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 212
            V+SL RGNTANV+RYFPTQALNFAF+D +K MF YKK+R+GYAKW                  VYS+DYA
Sbjct:   87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYA 156          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = -2
Query:    3 VVSLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 212
            V++L RGNTANVIRYFPTQALNFAFRD +K MF YKKD +GY KW                  VYS+DYA
Sbjct:   73 VMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAGNLASGGAAGATSLLFVYSLDYA 142          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  149 SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYA 216          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  148 SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYA 215          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  149 SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYA 216          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  148 SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYA 215          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  142 SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYA 209          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            SL RGNTANVIRYFPTQALNFAF+D +K MF +KKD++GY KW                  VYS+DYA
Sbjct:   93 SLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYA 160          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.491e-15
Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = -2
Query:    3 VVSLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 212
            +VS  RGNTANV+RYFPTQALNFAF+D  KS+ +Y ++R+GYAKW                  VYS+DYA
Sbjct:   73 IVSFWRGNTANVLRYFPTQALNFAFKDKIKSLLSYDRERDGYAKWFAGNLFSGGAAGGLSLLFVYSLDYA 142          
BLAST of FC921790 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = -2
Query:    3 SLGRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDREGYAKWRRXXXXXXXXXXXXXXXLVYSVDYA 206
            +L RGNTANVIRYFPTQALNFAF+D +K +F +KKDR+GY KW                  VYS+DYA
Sbjct:  147 ALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYA 214          
The following BLAST results are available for this feature:
BLAST of FC921790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ADT_SCHPO3.118e-1758.57ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_NEUCR3.447e-1658.57ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT2_MAIZE4.978e-1557.35ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_SOLTU4.978e-1557.35ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_MAIZE4.978e-1557.35ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_GOSHI4.978e-1557.35ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_ARATH4.978e-1557.35ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_WHEAT6.501e-1557.35ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT1_YEAST8.491e-1552.86ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT2_SOLTU1.109e-1455.88ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]

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Properties
Property NameValue
Genbank descriptionC06052D05T7 RindPdigS Citrus sinensis cDNA clone C06052D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921790 ID=FC921790; Name=FC921790; organism=Citrus sinensis; type=EST; length=213bp
CCGGCGTAGTCCACGGAGTAGACCAACAGGAGGGAAGTGGCACCGGCGGC
ACCCCCGGAGGCAAGGTTACCCCTCCTCCACTTGGCGTATCCCTCACGGT
CCTTCTTGTAGGCGAACATGGACTTGTAGGTGTCCCGGAAAGCGAAGTTC
AGGGCCTGAGTGGGGAAGTAACGGATGACGTTGGCGGTGTTACCACGCCC
CAAGGAGACAACA
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