CK938490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.518e-45 Identity = 89/113 (78.76%), Postives = 94/113 (83.19%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEEYCGQEH 343 TCDS KIDKFI G SLPLHEM GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPH FAVTRA+PGPSCGDVL VMQH+PELMFETLKHRA+EY ++ Sbjct: 539 TCDSDGKIDKFINGESSLPLHEMEGGRT-----YYLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDN 646
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.837e-45 Identity = 89/111 (80.18%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEEYCGQ 337 TCDS KIDKFIGG SLPLHEM G G G YYLGMFLGG+YEEALGG+HNLFGGPSVVRVLQSDGPH FAVTRA+ G SC DVL VMQHEP+LMFETLKHRA E+CGQ Sbjct: 551 TCDSDGKIDKFIGGESSLPLHEMEGHG----GGYYLGMFLGGSYEEALGGLHNLFGGPSVVRVLQSDGPHGFAVTRAVAGSSCADVLRVMQHEPQLMFETLKHRALEFCGQ 657
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.755e-42 Identity = 86/107 (80.37%), Postives = 89/107 (83.18%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KI+KFIGG SLPLHEM GC G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPH FAVTRA+ G S DVL MQHEPELMF+TLKHRAEE Sbjct: 523 TCDSDGKINKFIGGESSLPLHEMDNNGCSG-GRYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRAEE 628
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.082e-41 Identity = 84/107 (78.50%), Postives = 89/107 (83.18%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KI+KFIGG SLPLHE+ G G G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPH FAVTRA+PG S DVL MQHEPELMF+TLKHRAEE Sbjct: 536 TCDSDGKINKFIGGESSLPLHELDKNGSG--GRYFLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEE 640
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.407e-40 Identity = 83/107 (77.57%), Postives = 87/107 (81.31%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KIDKFIG SLPLHE+ GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGP +AVTRA+PGPS DVL VM HEPELMF+TLKHRAEE Sbjct: 548 TCDSDGKIDKFIGDESSLPLHELSGGE-----GYYLGMFLGGAYEEALGGVHNLFGGPSVVRVQQSDGPQSYAVTRAVPGPSSSDVLRVMHHEPELMFQTLKHRAEE 649
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.591e-40 Identity = 83/107 (77.57%), Postives = 86/107 (80.37%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KI+KFIGG SLPLHE+ G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQ DGPH FAVTRAM G S DVL MQHEPELMF+TLKHRAEE Sbjct: 529 TCDSDGKINKFIGGESSLPLHELDNNG------YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQKDGPHGFAVTRAMMGQSSADVLRAMQHEPELMFQTLKHRAEE 629
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37 Identity = 78/106 (73.58%), Postives = 84/106 (79.25%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS K+D FIGG SLPLHE+ G RG YYLGMFLGGAY+EALGG+HNLFGGPSVVRV QSDGPH FAVTRA GPSC DVL MQHEPE+MFE LK R + Sbjct: 539 TCDSDGKVDHFIGGRHSLPLHELPVHGT--RG-YYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTD 641
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.239e-26 Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFA 223 TCDS K+DKFIGG SLPLHE+ G G+ G YYLGMFLGGAYEEALGG+HNLFGGPSVVRV+QSD PH FA Sbjct: 433 TCDSDGKVDKFIGGESSLPLHEI---GSGDGGRYYLGMFLGGAYEEALGGLHNLFGGPSVVRVMQSDSPHSFA 502
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_SYNR3 (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain RCC307) GN=speA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEEYCG 334 TCDS K+ +FI + PL E+ GE PY++G+FLGGAY+E +G +HNLFG + V + L GP + V + G + DVL M+H PE + E L+ +EE G Sbjct: 506 TCDSDGKLARFIASGSAKPLLELHELKDGE--PYWIGLFLGGAYQEVMGNLHNLFGSTNAVSIRLSPGGP--YRVEHVVRGQTNSDVLEAMEHNPEALLERLRQASEEAIG 612
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_SYNPX (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain WH8102) GN=speA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.478e-14 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXS---LPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS ++D+FIG L LHE+ + PY +G+FL GAY+E +G +HNLFG + V + S G + + + G + DVL M+H+P ++ E L+ AE Sbjct: 510 TCDSDGRLDRFIGDGQPKQLLELHEL-----DDNNPYLIGLFLSGAYQEVMGNLHNLFGTTNAVHIRLSPGGS-YRIDHVVRGDTNADVLEAMEHDPRVLLERLRVAAE 612 The following BLAST results are available for this feature:
BLAST of CK938490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938490 ID=CK938490; Name=CK938490; organism=Citrus sinensis; type=EST; length=344bpback to top |