EY665943

Overview
NameEY665943
Unique NameEY665943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665943 vs. ExPASy Swiss-Prot
Match: PX11E_ARATH (Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 5.381e-77
Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 1
Query:   40 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCNTLVELGELGRLSTSM 495
            M+TLD TRAELAL+VLYLNKAEARDKICRAIQYGSKFLS GQPGTAQ VDK+TSLARKVFRLFKFVND H LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER ELLGRISLFCW+GSSVC + VE+GELGRLS+SM
Sbjct:    1 MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDKNTSLARKVFRLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRISLFCWLGSSVCTSAVEIGELGRLSSSM 152          

HSP 2 Score: 35.039 bits (79), Expect = 5.381e-77
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 2
Query:  548 YQAKLKKIQWKGL*HLAKSPMDIVVAVGLL*LGPKKV 658
            Y+AKL+K   + L  L KS MDI+VA+GLL L PK +
Sbjct:  166 YRAKLQKSNDRTL-ALIKSSMDIIVAIGLLQLAPKTI 201          
BLAST of EY665943 vs. ExPASy Swiss-Prot
Match: PX11C_ARATH (Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.724e-75
Identity = 146/185 (78.92%), Postives = 159/185 (85.95%), Query Frame = 1
Query:   40 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCNTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQIPS*T*KNPMERPLAL 594
            MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVFRLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE+LGRISLFCWMGSSVC +LVE+GELGRLS S+              NEQ  +   K+  ER LAL
Sbjct:    1 MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVFRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKS-NERSLAL 184          
BLAST of EY665943 vs. ExPASy Swiss-Prot
Match: PX11D_ARATH (Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.139e-74
Identity = 138/151 (91.39%), Postives = 147/151 (97.35%), Query Frame = 1
Query:   43 STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCNTLVELGELGRLSTSM 495
            +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFRLFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAELLGRISLFCWMGSSVC TLVE+GE+GRLS+SM
Sbjct:    3 TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLFCWMGSSVCTTLVEVGEMGRLSSSM 153          
BLAST of EY665943 vs. ExPASy Swiss-Prot
Match: PX115_ORYSJ (Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.296e-69
Identity = 120/169 (71.01%), Postives = 142/169 (84.02%), Query Frame = 1
Query:   40 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCNTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQ 546
            MS+L++ RA+LAL++LYLNKAEARDKICRAIQYGSKF+S+GQPG AQNVDKSTSLARKVFRLFKFVNDLHALISP  +GTPLPL+LLGKSKNALLSTFLFLDQ+VW GR+GIYKNKERAE L +I+ +C++GS+ C +++E+ EL RLS SM              NEQ
Sbjct:    1 MSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDKSTSLARKVFRLFKFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQ 169          

HSP 2 Score: 39.6614 bits (91), Expect = 1.296e-69
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 2
Query:  533 IKMNKYQAKLKKIQWKGL*HLAKSPMDIVVAVGLL*LGPKKV 658
            +K  +YQ KL+K   + L  L KS +DIVVA+GLL L PKKV
Sbjct:  165 LKNEQYQMKLQKCNERRL-ALIKSSLDIVVAIGLLQLAPKKV 205          
BLAST of EY665943 vs. ExPASy Swiss-Prot
Match: PX111_ORYSJ (Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.263e-65
Identity = 135/185 (72.97%), Postives = 147/185 (79.46%), Query Frame = 1
Query:   40 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCNTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQIPS*T*KNPMERPLAL 594
            MSTLDATRAEL LVVLYLNKAEARDKICRAIQYGSKF+S+GQPGTAQ+VD+ST+LARKVFRL K+VNDLH LISP  +GTPL LVLLGKSKNALLSTFLFLDQ VWLGR+GIYKNKER + + RISL+CWM SSVC  LVELGEL RLS SM              N+Q  S   K   ER LAL
Sbjct:    1 MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKS-KMKQSDERLLAL 184          
The following BLAST results are available for this feature:
BLAST of EY665943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PX11E_ARATH5.381e-7788.82Peroxisomal membrane protein 11E OS=Arabidopsis th... [more]
PX11C_ARATH8.724e-7578.92Peroxisomal membrane protein 11C OS=Arabidopsis th... [more]
PX11D_ARATH1.139e-7491.39Peroxisomal membrane protein 11D OS=Arabidopsis th... [more]
PX115_ORYSJ1.296e-6971.01Peroxisomal membrane protein 11-5 OS=Oryza sativa ... [more]
PX111_ORYSJ1.263e-6572.97Peroxisomal membrane protein 11-1 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-007-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665943 ID=EY665943; Name=EY665943; organism=Citrus sinensis; type=EST; length=849bp
TTCGAGGCCAAATCGTTGCGCACTTTTTTCGGATAAAAAATGAGTACACT
GGATGCAACCAGAGCAGAACTTGCACTTGTGGTTTTGTATTTGAATAAGG
CTGAAGCCAGGGACAAGATATGCAGAGCTATACAATATGGTTCAAAATTC
TTGAGTGATGGACAGCCTGGTACTGCCCAAAATGTTGACAAGTCAACCAG
CTTAGCCCGGAAAGTTTTCCGTCTTTTTAAGTTTGTCAATGATTTGCACG
CTCTTATCAGCCCAGTTCCCCAAGGAACTCCGCTACCACTTGTTTTGCTG
GGAAAGTCCAAGAATGCATTATTGTCAACTTTCTTATTTCTTGATCAAGT
CGTTTGGCTTGGCAGATCAGGCATCTACAAGAACAAAGAGCGTGCAGAAT
TGCTTGGTCGGATATCTCTTTTTTGTTGGATGGGTTCCTCAGTTTGTAAC
ACATTAGTTGAGCTTGGAGAGCTTGGGAGGCTTTCTACATCAATGAAAAA
GTTAGAGAAGGAGCTTAAGGACAGTGATAAGCATAAAAATGAACAAATAC
CAAGCTAAACTTAAAAAAATCCAATGGAAAGGCCTCTAGCACTTGGCCAA
ATCACCCATGGACATTGTGGTGGCGGTTGGGCTGCTTTAATTGGGCCCCA
AGAAAGTTTACTCCTTCGTGTAACAAGAAGCATTTTGGATTTGTTAACCT
CTTCCTCCTCTTGGTATCACTAACTTCCCACTTCCAGAAAAAACCCAAGG
ACCCTTGAATGGGAAAAGGGGGCTTTCGCTGGCACCAACTTCAATGGAAT
TTAAAATAATTAATTTCTAATGGGGCACCAAAAAACTCGAAAGGGTGGG
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