CK938459

Overview
NameCK938459
Unique NameCK938459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2138 contig Csv1_Contig2138:6..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.187e-104
Identity = 175/195 (89.74%), Postives = 186/195 (95.38%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAI 735
            FYQDFDLTWG  RAKIFNGGQLLSLSLD+VSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSSQGPTHDEIDFEFLGN+SG PYILHTNIF QGKGNREQQFYLWF PTRNFHTYS+IWKPQH+IFLVDN PIRVFKNAE LGVPFPKNQPM+IYSSLWNADDWATRGG  KTDW+KAPFTAYYRNF+AI
Sbjct:   32 FYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAI 226          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 8.800e-100
Identity = 165/213 (77.46%), Postives = 190/213 (89.20%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPC------NNCGSKWSSS 771
            F ++FDLTWG+ R KIF+GG++LSLSLDRVSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSS+GPTHDEIDFEFLGN +G+PY+LHTN+FAQGKGNREQQFYLWF PT+NFHTYS++W+PQH+IF+VDN+PIRVF NAE LGVPFPKNQPMKIYSSLWNADDWATRGG  KTDW+KAPFTAYYR F A  C      + C  K+ SS
Sbjct:   27 FNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSS 239          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.501e-99
Identity = 164/210 (78.10%), Postives = 188/210 (89.52%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPC---NNCGSKWSSS 771
            F+ +FDLTWGD R KIFNGG +LSLSLD+VSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSSQG THDEIDFEFLGN +G+PY+LHTN+FAQGKG+REQQFYLWF PT+NFHTYS++W+PQH+IFLVDN+PIRVF NAE LGVPFPK+QPM+IYSSLWNADDWATRGG  KTDW+KAPFTAYYR F A  C   + C  K+ SS
Sbjct:   28 FFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTASSGCDPKFKSS 237          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 2.748e-85
Identity = 138/205 (67.32%), Postives = 172/205 (83.90%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPCNNCGSKWS 765
            F  +FD+TWGD R K+ N G+LL+LSLDR SGSGFQ+K++YLFG+IDMQLKLV G+SAGTVTAYYL S+G T DEIDFEFLGN++G PY +HTN++ QGKG+REQQF+LWF PT +FHTYSV+W P H++F+VD+IP+R FKN + +G+ +PK QPM++YSSLWNAD WATRGG  KTDW+KAPFTA YRNFRA  C + G + S
Sbjct:   30 FDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSS 234          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.364e-84
Identity = 141/205 (68.78%), Postives = 170/205 (82.93%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPCNNCGSKWS 765
            FY  FD+TWG  RA IF  GQLL+ +LD+ SGSGFQSK++YLFG+IDM++KLV G+SAGTVTAYYLSS+G T DEIDFEFLGNV+GQPY++HTN+F  GKGNRE QFYLWF PT +FHTY+V+W P ++IFLVD IPIRVFKN E+ GV +PK+QPMKIYSSLW ADDWAT+GG  KTDWT APF+A YR+F  + C +  S W+
Sbjct:   27 FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWN 231          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.327e-84
Identity = 139/197 (70.56%), Postives = 169/197 (85.79%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPC 741
            FY +FD+TWG+ RA I   GQLL+ +LD++SGSGFQSK++YLFG+IDM++KLVAG+SAGTVTAYYLSS+G T DEIDFEFLGNV+GQPY+LHTN+F  GKGNRE QFYLWF PT +FHTY+V+W P ++IFLVD IPIRVFKN E+ GV +PK+QPMKIYSSLW ADDWAT+GG  KTDWT APF+A Y++F  + C
Sbjct:   26 FYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDC 222          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.843e-81
Identity = 138/197 (70.05%), Postives = 160/197 (81.22%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPC 741
            F +D ++TWGD R +I N G LL+LSLD+ SGSGFQSK +YLFG+IDMQ+KLVAG+SAGTVTAYYL S G T DEIDFEFLGN+SG PY LHTN+F QGKG+REQQF LWF PT +FHTYS++W PQ +IF VD  PIR FKN ES G  FPKNQPM++YSSLWNA++WATRGG  KTDW+KAPFTA YR F    C
Sbjct:   26 FQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEAC 222          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.321e-79
Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFR 729
            F  D ++ WG+ R KI N GQLL+LSLD+ SGSGFQSK +YLFG+IDMQ+KLV G+SAGTVT +YL S+G T DEIDFEFLGN+SG PY LHTN++ QGKG++EQQF+LWF PT NFHTYS++W PQ +I  VD+ PIR FKN ESLGV FPKN+PM++Y+SLWNADDWATRGG  KTDW+KAPF A YRN +
Sbjct:   24 FNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIK 216          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.725e-79
Identity = 138/206 (66.99%), Postives = 163/206 (79.13%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNF--RAIPCNNCGSKW 762
            FY+ FD+TWG+ RA IF  GQLL+ +LD+VSGSGFQSK++YLFG+IDM+LKLVAG+SAGTVTAYYLSS+G   DEIDFEFLGN +G PY +HTN+F  GKG+RE QF LWF PT +FHTY+V W P ++IFLVD IPIRVFKN E  GV +PKNQPM+IYSSLW ADDWAT GG  K DW+ APF A YRNF  ++       SKW
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKW 235          
BLAST of CK938459 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.253e-79
Identity = 133/197 (67.51%), Postives = 159/197 (80.71%), Query Frame = 1
Query:  151 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFGPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGXXKTDWTKAPFTAYYRNFRAIPC 741
            F +D ++TWGD R +I N G+LL+LSLD+ SGSGFQSK +YLFG++ MQ+KLV G+SAGTVT  YL S G T DEIDFEFLGN SG+PY LHTN++ QGKG++EQQF LWF PT NFHTY+++W PQ +IF VD  PIR FKN ESLG  FPKN+PM++YSSLWNADDWATRGG  KTDW+KAPFTA YR F+   C
Sbjct:   23 FQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEAC 219          
The following BLAST results are available for this feature:
BLAST of CK938459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
BRU1_SOYBN1.187e-10489.74Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH16_ARATH8.800e-10077.46Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH1.501e-9978.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH2.748e-8567.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.364e-8468.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH2.327e-8470.56Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH1.843e-8170.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.321e-7968.91Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH1.725e-7966.99Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH2.253e-7967.51Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_F02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938459 ID=CK938459; Name=CK938459; organism=Citrus sinensis; type=EST; length=775bp
GGGGAAGGTTTTCAAACAAACAGCTTCTCTCTCTTGTTGTGTTATAACTC
ATACAGCAAATTAAGAACTATGGGTTATCATTATTCTTGTAATGGGTTGT
TGTTATTGGTGAGTGTTTTGATGGTTGTTGCCTCATCAGCTGTGGGTAGC
TTCTATCAAGACTTTGATTTAACATGGGGTGATAAGAGAGCTAAGATTTT
CAATGGCGGCCAACTTCTTTCTCTGTCTCTAGACAGAGTTTCTGGCTCTG
GTTTTCAGTCCAAGAGAGACTACTTATTTGGCAGAATTGATATGCAGCTC
AAGCTTGTTGCTGGTGACTCTGCTGGCACTGTCACTGCCTACTATCTGTC
TTCGCAAGGGCCGACTCATGATGAGATTGATTTTGAGTTCTTGGGAAATG
TGAGCGGTCAGCCTTACATTCTTCACACAAATATATTCGCTCAGGGTAAA
GGCAACCGGGAGCAACAATTCTATCTCTGGTTTGGTCCCACAAGAAACTT
CCACACTTACTCCGTCATCTGGAAGCCCCAACACGTCATCTTCTTGGTAG
ATAACATTCCCATTAGAGTGTTCAAAAATGCTGAATCTCTTGGAGTTCCC
TTCCCTAAAAACCAACCAATGAAGATTTACTCAAGTCTTTGGAATGCTGA
TGACTGGGCTACAAGAGGAGGGTTNNNGAAAACTGACTGGACTAAGGCTC
CTTTCACAGCATATTACCGTAACTTCAGAGCCATTCCCTGTAACAACTGT
GGCTCTAAATGGTCATCAAGCTCCT
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