CX675499

Overview
NameCX675499
Unique NameCX675499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.539e-32
Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+AL++EL+GK PRK+ + G  SK +  + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPWL+
Sbjct:  535 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 654          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.539e-32
Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+AL++EL+GK PRK+ + G  SK +  + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPWL+
Sbjct:  535 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 654          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+AL++EL+GK PRK+ + G  SK +  + GDLK I +LK W L  +LV+KY + + +A  F +FL+P+L+  PEKR TA +CL+HPWL+
Sbjct:  528 WSTACMAFELATGDYLFEPHSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLN 647          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30
Identity = 59/120 (49.17%), Postives = 84/120 (70.00%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+A ++EL+G  PR  A+ G  S+ + +R G+L+ I +LK WSL  +LV+KY +   DA +F +FL+P+L+  PEKR +A +CL+HPWL+
Sbjct:  561 WSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 680          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.159e-29
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = -2
Query:  310 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLK-FWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 666
            WS AC A ELATGD LF  KSG+GF + +DHLAL++EL+GK PR I  GG +S+ Y    GDL++I  L   W L  +L +KY+FS  +A++F  FL+P+L++ PEKR TA+ CL H WL
Sbjct:  529 WSAACMAFELATGDHLFKPKSGKGFEKSDDHLALMIELLGKPPRFIFAGGDESRVYFTHKGDLRKIPDLSDQWPLFSVLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWL 648          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27
Identity = 55/120 (45.83%), Postives = 80/120 (66.67%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+A ++EL+G  P   A+ G  S+ + +R G+L+ I  LK W L  +L++KY +    A +F+ FL+P++++ PEKR +A  CLQHPWL+
Sbjct:  413 WSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 532          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.539e-27
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+A ++EL+G  PR  A+ G  S+ + +R G+L+ I +LK WSL  +LV+KY +   DA +F +FL+P+L+  PEKR +A    +HPWL+
Sbjct:  568 WSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGCLCRHPWLN 687          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27
Identity = 55/120 (45.83%), Postives = 80/120 (66.67%), Query Frame = -2
Query:  307 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 666
            WS AC A ELATGD LF   SG+ +  DEDH+A ++EL+G  P   A+ G  S+ + +R G+L+ I  LK W L  +L++KY +    A +F+ FL+P++++ PEKR +A  CLQHPWL+
Sbjct:  445 WSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.922e-23
Identity = 48/119 (40.34%), Postives = 74/119 (62.18%), Query Frame = -2
Query:  310 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 666
            WS AC   EL TGD LF    G  + +D+DH+A ++EL+G+ P  +   G  ++ + +  G L+ I +LKFW L+ +L +KY+FS+ +A+E ++FL P+L   P KR  A   + HPWL
Sbjct:  588 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 706          
BLAST of CX675499 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.141e-22
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = -2
Query:  310 WSFACTASELATGDMLFALKSGQGFCEDEDHLALVMELIGKRPRKIAIGGAQSKAYCDRHGDLKRIRRLKFWSLDRLLVDKYRFSEIDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 666
            WS AC A ELATGD LF    G  +  DEDHLA + EL+G  P  I   G   + +  ++G L  I +LK WSL  +L  KY +S  DA++F  FL P+LDF  EKR TA+  L+HP+L
Sbjct:  786 WSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIYKKGKHWREFFHKNGHLLHIHQLKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQEKRSTAKIALKHPFL 904          
The following BLAST results are available for this feature:
BLAST of CX675499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SRPK1_PONAB3.539e-3252.50Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN3.539e-3252.50Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK1_MOUSE1.345e-3151.67Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK2_MOUSE7.380e-3049.17Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SKY1_DICDI8.159e-2952.50Probable serine/threonine-protein kinase sky1 OS=D... [more]
SRPK3_HUMAN1.178e-2745.83Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
SRPK2_HUMAN1.539e-2747.50Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SRPK3_MOUSE2.010e-2745.83Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SKY1_YEAST3.922e-2340.34Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
SPK1_CAEEL1.141e-2247.06Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F07-L14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675499 ID=CX675499; Name=CX675499; organism=Citrus sinensis; type=EST; length=667bp
TTTTTTGCGANAAATTTATCTCTTTCTTGTCATTTCCTTGGAATGATCGT
TACTATTTTACATTTTAGTCAAATCGTAAACCAAAAAATAAAAATCTTAT
TATTAACGTAACAAACCAAAAAATAACAATCACAATCAACACTCACACAA
GTGCAGGGTGGGACTTGAATGTGACGCCGTGCGCCGGCCAGCACCTGTGA
TCCCCCACCCTCACTTTCCCACCTTGATCTCAAGTTTGCTCATTCCAACA
TCCACCTTTTCCACATTAGATTTATTTTTGGTTTCGTCTCGTGTAGAATT
CCTGAGACTAAGCCATGGGTGTTGCAGACACTGCTGAGCAGTTGGACGCT
TCTCTGGAGTAAAATCGAGAAGGGGAACAAGAAACTCTGCAAACTCACGA
GCATCAATCTCAGAGAACCTGTACTTGTCAACAAGCAATCGATCAAGTGA
CCAGAACTTCAGTCTCCGTATCCTCTTGAGATCGCCATGCCTATCACAAT
AAGCTTTTGATTGTGCTCCCCCAATAGCAATCTTTCTAGGCCTCTTTCCT
ATGAGTTCCATCACGAGAGCAAGGTGATCCTCATCTTCGCAAAAGCCTTG
TCCACTCTTAAGTGCAAACAACATGTCACCAGTAGCAAGCTCAGAAGCTG
TGCAGGCAAATGACCAC
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