CX675496

Overview
NameCX675496
Unique NameCX675496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12118 contig Csv1_Contig12118:422..1208. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA1_ARATH (Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 463.766 bits (1192), Expect = 4.885e-130
Identity = 210/261 (80.46%), Postives = 230/261 (88.12%), Query Frame = 2
Query:    2 DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 784
            +R  SPAGTLTF R SMCGAPARTVGWRDPGYIHT FL+ELWPN+ YTY++GHRL NG  IWS EYQFK+SP+PGQ+S+QQV+IFGDMGK E DGS+EYN+FQR SLNTT+QLI+DLK  D VFHIGDICYANGY+SQWDQF AQIEPIASTVPYMIASGNHER WP +GSFY  +DSGGECGV  E MFYVP +NRAK WYS+DYGMFRFC+ADTE DWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS   Y
Sbjct:  209 ERKLSPAGTLTFARNSMCGAPARTVGWRDPGYIHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAEVDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIASTVPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFY 469          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA27_ARATH (Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.377e-124
Identity = 200/254 (78.74%), Postives = 224/254 (88.19%), Query Frame = 2
Query:   14 SPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSD 775
            SPAGTLTF R SMCGAPARTVGWRDPG+IHT  L++LWPN  YTY++GH L NG+ +WS  + FK+SPYPGQDSLQ+VIIFGDMGK E DGSNEYN++Q GSLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+ASGNHERDWP +GSFYG  DSGGECGV  E MF  P EN+AKFWYS DYGMFRFC+ADTE DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS++
Sbjct:  211 SPAGTLTFTRNSMCGAPARTVGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTN 464          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA24_ARATH (Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 1.860e-121
Identity = 195/254 (76.77%), Postives = 220/254 (86.61%), Query Frame = 2
Query:   14 SPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSD 775
            SPAGTLTF R SMCG PAR VGWRDPG+ HT FL+ELWPN  Y Y+LGH L NG+ IWS  Y F +SPYPGQDS Q+VIIFGDMGK E DGSNEYN++Q GSLNTT Q+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSFY   DSGGECGV  E MFY P ENRAKFWY TDYGMFRFC+AD+E DWREGTEQY+FIE+CLA+VDR+ QPWLIF+AHRVLGYS++
Sbjct:  215 SPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLGHDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTN 468          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: NPP_HORVU (Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 9.644e-86
Identity = 139/205 (67.80%), Postives = 167/205 (81.46%), Query Frame = 2
Query:  170 NGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 784
            +G+ +W+  Y F+A P PGQ+SLQ++I+FGDMGK E DGSNE+ N+Q GSLNTT +LI+DL N DIVFHIGD+ YANGY+SQWDQFTAQ+ PI++  PYM+ASGNHERDWP TG F+   DSGGECGV  E M+Y P ENRA FWY  DYGMFRFC+ D+E DWREGT QY+FIE CL++VDR+ QPWLIF AHRVLGYSS+  Y
Sbjct:   20 DGSVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDNYDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWY 224          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA9_ARATH (Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.195e-35
Identity = 98/261 (37.55%), Postives = 132/261 (50.57%), Query Frame = 2
Query:   50 MCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRG---SLNTTRQLIQDLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT------GSFYGNMDSGGECGVLVENMFYVP---TE--------NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHR 754
            MC APA  TVGWRDPG+     ++ L     Y Y++G  L      WS  + F +     +++L    +FGDMG         Y  F RG   SL+T + +++D++ +      IV HIGDI YA GY   WD+F  QIEPIAS VPY +  GNHE DWP         ++    DSGGECGV     F +P   TE             +YS D G   F    TE D+ +G +QY F++  L SV+R K P+++   HR
Sbjct:  196 MCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG----WSEIHSFVSRNEGSEETL--AFMFGDMGC-----YTPYTTFIRGEEESLSTVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQPWKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHR 445          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA2_ARATH (Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.543e-35
Identity = 94/274 (34.31%), Postives = 142/274 (51.82%), Query Frame = 2
Query:   29 LTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNF---QRGSLNTTRQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDW-------PGTGSFYGNMDSGGECGVLVENMFYVPTEN----------RAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSD 775
            + + R  MC +PA  T+GWRDPG+I    ++ L     Y Y++G    + +  WS  + + A     ++++    +FGDMG      +  Y  F   Q  S++T + +++D++ +     ++ HIGDI YA GY   WD+F AQ+EPIASTVPY +  GNHE D+           S YGN D GGECGV     F +P  +              +YS D G   F    TE ++ +G  QY FI+  L SVDR+K P+++   HR +  +S+
Sbjct:  191 MRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQVG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMGC-----ATPYTTFIRTQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN 452          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PAPL_MOUSE (Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.425e-12
Identity = 70/232 (30.17%), Postives = 104/232 (44.83%), Query Frame = 2
Query:   95 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW-----REGTE-QYRFIEHCL--ASVDRQKQPWLIFLAHR 754
            YIH   LR+L P A Y Y+ G      +  WS  ++F A    G     ++ +FGDMG   AD        +R     T+Q +      D V H+GD  Y     N  +   D+F   IEP+A+++PYM   GNHE+ +      + N  +           F +P +N    WYS D G        TE  +     R   E Q+R++E+ L  A+ +R  +PW+I + HR
Sbjct:   92 YIHRVTLRKLQPGAQYVYRCG-----SSQGWSRRFRFTALKN-GVHWSPRLAVFGDMG---ADNPKALPRLRRD----TQQGM-----FDAVLHVGDFAYNMDQDNARVG--DRFMRLIEPVAASLPYMTCPGNHEQRYN-----FSNYKA----------RFSMPGDNEG-LWYSWDLGPAHIISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHR 287          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PAPL_HUMAN (Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11
Identity = 64/234 (27.35%), Postives = 97/234 (41.45%), Query Frame = 2
Query:   95 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYA----NGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW------REGTEQYRFIEHCL--ASVDRQKQPWLIFLAHR 754
            YIH   LR+L P   Y Y+ G         WS  ++F+A    G     ++ +FGD+G D                    +L +D +    D V H+GD  Y     N  +   D+F   IEP+A+++PYM   GNHE  +      + N  +           F +P +N    WYS D G        TE  +           Q+R++E  L  A+ +R  +PW+I + HR
Sbjct:   92 YIHRVTLRKLLPGVQYVYRCG-----SAQGWSRRFRFRALKN-GAHWSPRLAVFGDLGADNP--------------KAVPRLRRDTQQGMYDAVLHVGDFAYNLDQDNARVG--DRFMRLIEPVAASLPYMTCPGNHEERYN-----FSNYKA----------RFSMPGDNEG-LWYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHR 287          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA23_ARATH (Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11
Identity = 62/249 (24.90%), Postives = 95/249 (38.15%), Query Frame = 2
Query:   92 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIF-GDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNI-DIVFHIGDICYANGYIS------------------------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAH 751
            G IH   +  L P   Y Y+ G    +     S E  F+  P P +D+    I F GD+G                  NTT  +   ++N   +V  +GD+ YAN Y +                        +WD +   +EP+ S VP M+  GNHE +   +G  + +              F VP     + +  +YS D G   F +     D+     QY +++  L+ VDR   PWL+   H
Sbjct:  140 GIIHHVLIDGLEPETRYYYRCGD---SSVPAMSEEISFETLPLPSKDAYPHRIAFVGDLGLTS---------------NTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSCSFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSYSE----------RFAVPASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMH 360          
BLAST of CX675496 vs. ExPASy Swiss-Prot
Match: PPA21_ARATH (Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11
Identity = 58/223 (26.01%), Postives = 94/223 (42.15%), Query Frame = 2
Query:   92 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP--YPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAH 751
            G IH   +  L PN  Y Y+ G            E+ FK  P  +P      +  + GD+G+ +                T R L Q  K + D+    GD+ YA+ +   WD F   +E +AST P+M+  GNHE +     SF  N     +       M +  + + +  +YS D       +  +   +   ++QY +++  L  VDR+K PWL+ + H
Sbjct:  107 GKIHHVKIGPLKPNTKYYYRCGGH--------GDEFSFKTPPSKFP-----IEFAVAGDLGQTDW---------------TVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTRPWMVTEGNHEIE-----SFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH 296          
The following BLAST results are available for this feature:
BLAST of CX675496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PPA1_ARATH4.885e-13080.46Probable inactive purple acid phosphatase 1 OS=Ara... [more]
PPA27_ARATH1.377e-12478.74Probable inactive purple acid phosphatase 27 OS=Ar... [more]
PPA24_ARATH1.860e-12176.77Probable inactive purple acid phosphatase 24 OS=Ar... [more]
NPP_HORVU9.644e-8667.80Nucleotide pyrophosphatase/phosphodiesterase (Frag... [more]
PPA9_ARATH1.195e-3537.55Probable inactive purple acid phosphatase 9 OS=Ara... [more]
PPA2_ARATH4.543e-3534.31Probable inactive purple acid phosphatase 2 OS=Ara... [more]
PAPL_MOUSE2.425e-1230.17Iron/zinc purple acid phosphatase-like protein OS=... [more]
PAPL_HUMAN2.053e-1127.35Iron/zinc purple acid phosphatase-like protein OS=... [more]
PPA23_ARATH4.574e-1124.90Purple acid phosphatase 23 OS=Arabidopsis thaliana... [more]
PPA21_ARATH7.803e-1126.01Purple acid phosphatase 21 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_62F05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F05-L10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675496 ID=CX675496; Name=CX675496; organism=Citrus sinensis; type=EST; length=786bp
TGATAGGACATATTCCCCTGCTGGAACACTGACATTTGGACGTGGGAGTA
TGTGTGGTGCACCAGCAAGGACGGTGGGATGGCGTGATCCCGGCTACATA
CACACCGGCTTTTTGAGGGAGTTGTGGCCCAATGCAATGTACACTTACAA
GCTGGGCCATAGATTGTTCAATGGTACATATATTTGGAGTTCAGAGTATC
AGTTTAAAGCATCTCCTTATCCTGGTCAAGATTCTTTGCAGCAAGTAATA
ATTTTTGGCGACATGGGAAAGGATGAAGCTGATGGTTCTAATGAATACAA
CAACTTCCAGCGTGGTTCTCTTAACACTACTAGACAGCTTATTCAAGACT
TGAAGAACATTGATATAGTTTTCCACATTGGAGATATATGTTATGCAAAT
GGCTACATCTCACAGTGGGACCAGTTTACAGCACAAATTGAGCCAATTGC
ATCAACTGTGCCATATATGATTGCAAGTGGTAACCATGAGCGTGATTGGC
CGGGAACAGGTTCTTTCTATGGAAACATGGATTCTGGTGGAGAATGCGGT
GTGTTGGTTGAGAACATGTTCTATGTCCCAACTGAGAACAGGGCTAAGTT
CTGGTACTCCACGGACTATGGCATGTTCAGATTTTGTATAGCTGATACAG
AACAAGATTGGAGAGAGGGAACCGAGCAATACAGATTCATTGAGCACTGC
CTAGCATCTGTTGACAGGCAAAAGCAACCATGGTTGATATTCCTGGCACA
TAGGGTTCTTGGATATTCTTCTGATTTATCCTATGC
back to top