CK938422

Overview
NameCK938422
Unique NameCK938422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB3_ORYSJ (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica GN=MUB3 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.375e-28
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            +E+KFR++DGTDI    Y  STTV+ LK+ ++A WPQ K ITPK++ND+KLI+AG+ILEN+RTLA+SR+ VG++P GV TMHVV++P               KQN C C IL
Sbjct:    8 IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB4_ORYSJ (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica GN=MUB4 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.577e-24
Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 2
Query:  329 VELKFRIYDGTDI----CHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            VE+KFR++DG+DI    C+   A +TTVA LK ++VA+WP+ KTI PK+ NDVKLI  GKILEND+ +A  R   GDLPS   TMHVV+QP  A          + K   C+C IL
Sbjct:   23 VEVKFRLFDGSDIGPLRCN---AVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB3_ARATH (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana GN=MUB3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.739e-23
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            +++KFR+YDG+DI    Y++++TV  LKQ++V++WP+GKT+ PK IN+VKLI +GKILEN++T+   +   GD+  GV  MHVV+QP +A            K   C C IL
Sbjct:    7 IDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISSGKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB6_ARATH (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana GN=MUB6 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.271e-23
Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            +ELKFR+ DGTDI    Y  S TV++LK++L+++WP+ K  TPK++ND+KLI+AGKILEN+RTLA+SR+ V +LP  + TMH+V++                 +N C C IL
Sbjct:    8 IELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB5_ARATH (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana GN=MUB5 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23
Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSR--ITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            +ELKFR+ DGTDI    Y+   TVA+LK++++A+WP+ K   PK IN+VKLI+ GKILEN++TL+++R  IT+G+LP  VTTMHVV++P +             +++ C C IL
Sbjct:    7 IELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB4_ARATH (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana GN=MUB4 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQ--PLVAXXXXXXXXXXMQKQNSCACIIL 664
            VELKFR+YDG+D+    Y+ + TV+ LK+++V+EWP+ K I PKS +D+KLI+AGKILEN +T+A  +    DLP  V TMHVV+Q  P  A            +++ C+C I+
Sbjct:    7 VELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINAGKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB2_ARATH (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.186e-21
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQ-KQNSCACI 658
            +E+KFR+ DG+DI    +  +TTVATLK+ +VA+WP+ K   PK++ DVKLI AG+ILEN++T+ D R  VG+    VTTMHV+IQ  V              KQN C C+
Sbjct:    8 LEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCL 118          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB1_ORYSJ (Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica GN=MUB1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20
Identity = 49/111 (44.14%), Postives = 74/111 (66.67%), Query Frame = 2
Query:  332 ELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            E+KFR+ DGTDI    Y +++TVATLK+ +VA+WP+ K   P+++ND+KLI+AGKILEN++TL++ +  + D  SG+TTMHVV++   +            K   C C I+
Sbjct:   10 EIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINAGKILENNKTLSECKSPICDF-SGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM 119          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB2_ORYSJ (Membrane-anchored ubiquitin-fold protein 2 OS=Oryza sativa subsp. japonica GN=MUB2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQ 586
            VE++FR+ DG+DI    +  +TTV  LK+ ++A WPQGK I P+++NDV +I+AG++LEN+RTLA+SR    + P G  TMHVV++
Sbjct:   14 VEVRFRLDDGSDIGPSMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVTIINAGQVLENNRTLAESRNLAAESPEGPITMHVVVR 99          
BLAST of CK938422 vs. ExPASy Swiss-Prot
Match: MUB1_ARATH (Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana GN=MUB1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 2
Query:  329 VELKFRIYDGTDICHGTYASSTTVATLKQQLVAEWPQGKTITPKSINDVKLIHAGKILENDRTLADSRITVGDLPSGVTTMHVVIQPLVAXXXXXXXXXXMQKQNSCACIIL 664
            +E+KFR+ DG+DI    +  +TTV+ LK+ +++EWP+ K   PK++ +VKLI AGK+LEN +T+ D R  V +L   VTTMHV+IQ  V             K N C C ++
Sbjct:    8 LEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEKEKKPKGD--PKMNKCVCSVM 117          
The following BLAST results are available for this feature:
BLAST of CK938422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MUB3_ORYSJ1.375e-2853.57Membrane-anchored ubiquitin-fold protein 3 OS=Oryz... [more]
MUB4_ORYSJ4.577e-2450.86Membrane-anchored ubiquitin-fold protein 4 OS=Oryz... [more]
MUB3_ARATH1.739e-2345.54Membrane-anchored ubiquitin-fold protein 3 OS=Arab... [more]
MUB6_ARATH2.271e-2347.32Membrane-anchored ubiquitin-fold protein 6 OS=Arab... [more]
MUB5_ARATH2.966e-2347.37Membrane-anchored ubiquitin-fold protein 5 OS=Arab... [more]
MUB4_ARATH5.595e-2245.61Membrane-anchored ubiquitin-fold protein 4 OS=Arab... [more]
MUB2_ARATH6.186e-2146.85Membrane-anchored ubiquitin-fold protein 2 OS=Arab... [more]
MUB1_ORYSJ6.839e-2044.14Membrane-anchored ubiquitin-fold protein 1 OS=Oryz... [more]
MUB2_ORYSJ5.789e-1950.00Membrane-anchored ubiquitin-fold protein 2 OS=Oryz... [more]
MUB1_ARATH7.561e-1941.96Membrane-anchored ubiquitin-fold protein 1 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004442_H11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938422 ID=CK938422; Name=CK938422; organism=Citrus sinensis; type=EST; length=907bp
GGGGGAGCAAATAAGAATGCCCCCTTACTGTAGCCAAGAAGTGAAAAACC
CTAACTCGATTCTCATGGCTTCGTGATCAGGAATTGAGTGAACGAAGAGT
GATCGGATCATATGAAGTGCTTGTTGGATCGGTTTGGCTATTCAGCGGCT
GATTTAGATGCGCCTTTTTTGCATGATTGTACTCCAAACAAACCTTTTGT
CAGATTCACGCAGGTAAGTAGGGTGAGACAGAATTCTGGAACTGGGACTG
AAGCCATTGATTTGGTATTACATCGGATCTGCAAGCTGGGAAAAGTAGAA
GGGCACTATGGGTGAAGGAGAGGAGTGTGTTGAGCTGAAATTTCGCATCT
ATGATGGAACAGATATTTGTCATGGTACCTATGCGTCATCTACCACAGTT
GCAACTCTTAAGCAGCAGCTGGTTGCTGAGTGGCCCCAAGGTAAAACAAT
CACACCCAAATCAATAAATGATGTAAAACTCATACATGCTGGTAAAATTT
TGGAGAATGACAGGACACTTGCAGATTCAAGAATAACTGTTGGTGACCTT
CCTAGTGGTGTTACTACCATGCATGTTGTCATACAGCCCCTTGTTGCTAA
AAAGAAGACAGAGAAGACCAAGGAAGAGATGCAGAAGCAGAATTCATGTG
CATGTATTATCCTTTAAAGTGGGGAGAATGGTTTGTGGCTTCCATGAGTG
AACCAGCATATAAGAGATTCTACGATCCAGCTTTCTAATTGCTATCTCGT
ATCTGCCGGCTGCCTTGATTCCTTTCTTAATGTGGTTGATTCAAGTGTTG
TTTGTGTTATAATCATTTCTCATTGTCTTACTTTCAGAAGACTTGTGTAT
GCAGTCTAGTTTCGTGACTCTGGTGATTTAATATTCGTTTTAAAAAAAAA
AAAAAAA
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