CK938413

Overview
NameCK938413
Unique NameCK938413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2110 contig Csv1_Contig2110:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_MOUSE (Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.148e-26
Identity = 58/131 (44.27%), Postives = 89/131 (67.94%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + +  A G+  +V+S+    R+KVP ++G S +DW+RLT++  DL GLKG   +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LFN+ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAPGSQQRVSSQ---GRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGGLIE--VTEEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGADGTDLFNEVHRWVNYESMLKECLVGRM 129          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_RAT (Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=Cyb5r4 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + +  A G+  +VAS+    R+KVP ++G S +DW RLT++  D  GLKG   +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LFN+ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAPGSQQRVASQ---GRSKVPLKQGRSLMDWFRLTKSGKDFTGLKGGLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGADGTDLFNEVHRWVNYESMLKECLVGRM 129          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_HUMAN (Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26
Identity = 58/131 (44.27%), Postives = 88/131 (67.18%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + S  A  +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQSFPAPRSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRM 129          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_DANRE (Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPA--SRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + +  AAG+  +VA   PA  SR KV  + G+S +DW+RLT++  DL GL+G+  +  +T DE+K+H ++   WT ++G VYNLS YM FHPGG + LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQAFPAAGSQQRVA---PAGQSRNKVVLKPGHSLLDWIRLTKSGQDLTGLRGRLIE--VTEDELKKHNTKKDCWTCIRGMVYNLSAYMDFHPGGEEELMRAAGIDSTDLFDEVHRWVNYESMLKECLVGRM 131          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_BOVIN (Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26
Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + S     +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG D LM+A G D T LF++ H WVN E +L++CLVG +
Sbjct:    4 VPSQSFPGPSSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTDLFDQVHRWVNYESMLKECLVGRM 129          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25
Identity = 55/131 (41.98%), Postives = 86/131 (65.65%), Query Frame = 3
Query:  288 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            + + S  A  +  +VA+     R+KVP + G S +DW+RLT++  DL GLKG+     +T +E+ QH  +   W  ++G VYN++PYM++HPGG + LMKA G+D T LF++ H WVN E +L++CL+G +
Sbjct:    4 VPSQSFPAPSSQQRVAA---IGRSKVPLKPGRSLMDWIRLTKSGKDLTGLKGRLID--VTEEELAQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIGRM 129          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: YDAA_SCHPO (Uncharacterized protein C1F12.10c OS=Schizosaccharomyces pombe GN=SPAC1F12.10c PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17
Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 3
Query:  306 SAAGTSVKVASRKPAS--RAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            S A ++V+ + ++P    R K     G+SQ++W +L  +  +L+G++       +T +E+ +H+++   W  ++G+VYN+S Y+ +HP G   ++   G+D T +F K+HAWVN E LL+   VG L
Sbjct:   23 SPASSNVEHSEKQPRRDFRVKKYVAPGFSQLNWSKLVASGQNLSGVEKPIP---VTKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIFMKFHAWVNEEALLKTSFVGFL 146          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: YMW3_YEAST (Uncharacterized heme-binding protein YMR073C OS=Saccharomyces cerevisiae GN=YMR073C PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14
Identity = 56/174 (32.18%), Postives = 81/174 (46.55%), Query Frame = 3
Query:  282 NVIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLT-------------QTHPDL---------------AGLKGQSNKRLITMDE-----------VKQH-QSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMK-AVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            +V   + SS     +  +SRKP  R K+  + G+S +DW  LT             Q   DL               + LK Q   + I + +           VK+H + E  +W V+ G+VY++S Y+KFHPGG D+L+K     D    FNKYH WVN E LL+ C +G +
Sbjct:   26 SVAHPAISSPLHMPMSKSSRKPLVRTKIRLDPGHSALDWHSLTSNPANYYTKFVSLQLIQDLLDDPVFQKDNFKFSPSQLKNQLLVQKIPLYKIMPPLRINRKIVKKHCKGEDELWCVINGKVYDISSYLKFHPGGTDILIKHRNSDDLITYFNKYHQWVNYEKLLQVCFIGVV 199          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: YJ83_SCHPO (Uncharacterized heme-binding protein C330.03c OS=Schizosaccharomyces pombe GN=SPCC330.03c PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 41/130 (31.54%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  291 DASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            +A+S    G   +   +K  ++ K+P   G++Q DW  L  +  +L+G++   +   +T +E+ +H S    W  ++G+VYN++ Y+ +HP G   ++K  G D T  + K+H WVN E LL+   VG L
Sbjct:   20 EANSKDTKGLKEERKRKKRKNKYKIP--PGHTQQDWDALVASGKNLSGVESPIS---VTAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATKPYLKHHDWVNEEELLKTSFVGYL 144          
BLAST of CK938413 vs. ExPASy Swiss-Prot
Match: FAD5_MORAP (Delta(5) fatty acid desaturase OS=Mortierella alpina GN=DES1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 29/80 (36.25%), Postives = 51/80 (63.75%), Query Frame = 3
Query:  441 GQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGVDMLMKAVGKDCTALFNKYHAWVNAEFLLEKCLVGTL 680
            G    +  T +E+  H ++G ++  ++GRVY+++ ++  HPGGVD L+   G+D T +F  YHA+  A+ +++K  VGTL
Sbjct:    2 GTDQGKTFTWEELAAHNTKGDLFLAIRGRVYDVTKFLSRHPGGVDTLLLGAGRDVTPVFEMYHAFGAADAIMKKYYVGTL 81          
The following BLAST results are available for this feature:
BLAST of CK938413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NB5R4_MOUSE1.148e-2644.27Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r... [more]
NB5R4_RAT1.959e-2644.27Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=... [more]
NB5R4_HUMAN1.959e-2644.27Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R... [more]
NB5R4_DANRE4.364e-2645.86Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4... [more]
NB5R4_BOVIN4.364e-2643.51Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 ... [more]
NB5R4_XENTR2.829e-2541.98Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
YDAA_SCHPO8.249e-1733.07Uncharacterized protein C1F12.10c OS=Schizosacchar... [more]
YMW3_YEAST1.720e-1432.18Uncharacterized heme-binding protein YMR073C OS=Sa... [more]
YJ83_SCHPO2.934e-1431.54Uncharacterized heme-binding protein C330.03c OS=S... [more]
FAD5_MORAP1.780e-1136.25Delta(5) fatty acid desaturase OS=Mortierella alpi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938413 ID=CK938413; Name=CK938413; organism=Citrus sinensis; type=EST; length=850bp
GGGGGACTTTGACTTTTGAATTTGATTAGAGATTGATATAGATATTCTAA
AATACCAATATTAAAACCTAAACTATTGATGCTTCGGCTTCAAAATTGAT
TGCTGTGAACGCTGAAAGACTTGGAGAGATGGAGAACGATAACGACTTCA
CATTTTGCAGGGTCCAAAAGAATCAAAGTTCAGATGCTGATGGTAGTGTC
GAAAATCAAAGCAGCGGGTTTTTATGGAAACAAGATGAATTGCCGTCAAA
GACGAATAAGACGGTGGGGTTTCTGTCATATAATGTTATTGATGCATCGT
CTTCATCAGCAGCTGGAACTTCTGTGAAAGTTGCGAGCCGTAAGCCGGCG
TCTCGGGCCAAGGTTCCTTTTGAGAAGGGCTATAGCCAAGTGGATTGGCT
TAGACTTACTCAAACTCATCCTGATCTTGCAGGTTTGAAGGGACAATCAA
ATAAGAGGCTGATAACCATGGATGAAGTTAAACAGCATCAGAGTGAAGGT
TCCATGTGGACTGTCTTAAAAGGTCGTGTATACAATTTATCTCCGTACAT
GAAGTTTCACCCTGGAGGTGTTGATATGCTGATGAAGGCAGTGGGTAAAG
ACTGTACGGCTTTGTTCAATAAATACCATGCTTGGGTTAACGCCGAGTTT
TTATTGGAGAAGTGCCTTGTGGGCACTCTGGATGATAGTCGACCAAGGCA
GTGATACTCAGCCAACTTAGAAGTGATTCTTTGCCCATGTAATCTTACGA
TGCTCCCTGGCCTCAACATTCTACTTTCCATGTTTTTGTTATACAGCATA
ACCATTCAACCCCTTTTTTTGCCAGTAGGGGATAATTTCATTGCATCTTT
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