CK938401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTY (UPF0047 protein yjbQ OS=Salmonella typhimurium GN=yjbQ PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.799e-33 Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 191 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQGIWL EHR PRK++ TL G Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTI (UPF0047 protein yjbQ OS=Salmonella typhi GN=yjbQ PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.799e-33 Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 191 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQGIWL EHR PRK++ TL G Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YJBQ_ECOLI (UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.055e-32 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 191 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQGIWL EHR R+++ TL G Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YJBQ_ECO57 (UPF0047 protein yjbQ OS=Escherichia coli O157:H7 GN=yjbQ PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.055e-32 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 191 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQGIWL EHR R+++ TL G Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YE72_SCHPO (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe GN=SPAC4A8.02c PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.589e-31 Identity = 68/138 (49.28%), Postives = 96/138 (69.57%), Query Frame = 2 Query: 197 QKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNGI 610 Q+ +TL +G ++IT +VK++ + L F G + F+ HTSA+LTINEN+D+D R D L+KIVPE SA ++HT EG DDMPAH+KSS+ G +LT+PIT+G+L++GTWQ I L E R P R +V T+ G+ Sbjct: 5 QRIITLDRRSKGFYIITNDLVKKLPE-LKSFSSGTVNFFIQHTSAALTINENWDADTRADMNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDIQLAEFRRQPHSRTIVCTIIGL 139
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: Y1880_SYNY3 (UPF0047 protein sll1880 OS=Synechocystis sp. (strain PCC 6803) GN=sll1880 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.354e-21 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 2 Query: 188 RWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPE-GRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 R Q+ + + + H KI + S K GL +F+ HTSASL I EN D DV D F ++VPE GR ++H+ EG DDMPAHI+S++ + IPI +G+L +GTWQG++L EHR P R+V++ ++G Sbjct: 9 RQHQEILVIATQGKSLHNFNSKIQAVVQH--SGVKTGLCTVFVRHTSASLIIQENADPDVLTDLAIFFAQLVPEDGRR--YRHSTEGLDDMPAHIRSALTKTSEHIPIVNGRLGLGTWQGVFLWEHRQRPHQREVIVHVSG 145
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: Y1081_METJA (UPF0047 protein MJ1081 OS=Methanocaldococcus jannaschii GN=MJ1081 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 242 ITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHT-LEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 ITP I+ I++ S+ K G+A +++ HT+A +TINEN D V+ D FL+ ++P+ W T LEG D AHIKSS+ GC+ TI I DG+ +GTWQGI+ E D P R+ + + G Sbjct: 23 ITPYIISAISE--SKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKN----WNFTHLEGNSD--AHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEF-DGPRRREFYVKIIG 136
BLAST of CK938401 vs. ExPASy Swiss-Prot
Match: YUGU_BACSU (UPF0047 protein yugU OS=Bacillus subtilis GN=yugU PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 254 IVKEIAQDLSE--FKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEG--PDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEHRDAPTPRKVVITLNG 607 I +E+ L E G A ++ HT+A +TINEN D DV+ D +++ P W+H L+ + AH+KSS G + + + +G+L +GTWQGI+ CE D P R I + G Sbjct: 18 ITREVEAFLQETGITSGAALIYCPHTTAGITINENADPDVKKDMLRRFDEVYP------WEHELDRHMEGNTAAHMKSSTVGASQHVIVENGRLILGTWQGIYFCEF-DGPRTRTCYIKMMG 132 The following BLAST results are available for this feature:
BLAST of CK938401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938401 ID=CK938401; Name=CK938401; organism=Citrus sinensis; type=EST; length=818bpback to top |