EY665936

Overview
NameEY665936
Unique NameEY665936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665936 vs. ExPASy Swiss-Prot
Match: YRAR_ECOLI (Uncharacterized protein yraR OS=Escherichia coli (strain K12) GN=yraR PE=4 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.233e-26
Identity = 60/121 (49.59%), Postives = 86/121 (71.07%), Query Frame = 1 
Query:   34 WDMVVAFAKRAREMGARHLIVISAIGADPKSSIFYNRVKGEMEQALKAQDWPQLTIVRPSLLLGERLEPRLAEQLAGPLSRLIPGKYHGIEVCELARAMWRLALE-EQDGVRVVESDELRK 393
            + +VV  A   R +GA+H++V+SA+GA+  S  FYNRVKGEME+AL AQ+WP+LTI RPS+LLG+R + R+ E L  PL RL+PG +  I+  ++AR M   ++  E +GV ++ S ELRK
Sbjct:   88 YTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRK 208
The following BLAST results are available for this feature:
BLAST of EY665936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YRAR_ECOLI2.233e-2649.59Uncharacterized protein yraR OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-007-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665936 ID=EY665936; Name=EY665936; organism=Citrus sinensis; type=EST; length=923bp
ACCTGCAGTACGGTCCGGAATTCCGGGTCGACCTGGGACATGGTCGTGGC
CTTTGCCAAGCGCGCCCGGGAAATGGGTGCGCGGCACCTGATCGTGATCA
GCGCGATTGGTGCCGATCCGAAATCCTCGATCTTCTACAATCGGGTCAAG
GGCGAGATGGAACAGGCGCTGAAGGCTCAGGATTGGCCGCAGTTGACCAT
CGTCCGACCTTCACTGTTGCTGGGTGAGCGGTTGGAGCCACGCCTGGCCG
AGCAACTGGCCGGGCCATTGTCGCGGCTGATTCCGGGTAAATACCACGGC
ATTGAAGTGTGTGAACTGGCGCGCGCGATGTGGCGGCTGGCGCTGGAAGA
GCAGGATGGGGTGCGGGTTGTGGAGTCGGATGAGTTGCGTAAGCTCGGCA
AGTAACCCGTAATCCAGGCCGAACACAATCAAAATGTGGGGGGGGCGACA
AGACACACTCTACCCCCGCTACCCGGCGCCAGAACCGAGCGCCCACCCCC
CCCTCCCCCTAAACCTTCGCCACCGCACCGCCCCGCCTCTCTCCTAAATA
TCTGCACCACACCTCCGCTAAACCGACGCAAACTGTAAGCCACCGCTTAG
CTTCCGGTAAAGCTATAGGGTGCTACATAGCCTCCTTGCCCTGTTCCCAA
TGCCGCCATTAAAGCGAGGCGATCCGTCTAAACCACGCACTACCTCTCAA
CTATAAATACTACGACGGGAAATCCCACTACCTTACTCCCTCAACACACC
CCATCACGACCACAAACCAAAACCCACCCTACCCAACTCCCCACCCACTC
ACCACCCTCCTCAATTCGTCACCCACTCCTCAAAAACAAAACTGTTCCAG
TACCGACACCTCTCCGCATACCCAGCGAACCACGCAAGAGGATAATGGAG
ATAATTATCCAAAAGCTGCAACA
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