CN187669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 333.954 bits (855), Expect = 5.677e-91 Identity = 163/200 (81.50%), Postives = 186/200 (93.00%), Query Frame = 3 Query: 6 LFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 LFTTITVDE APGLKTILSF+VPDQRSGK+E+QYLHDYAGI TSVGLTANPIVNFS V+GTN+++LGTD+SFD+K+G+FTKCNAGLSF NADL+ASLNLNNKGD+L ASYYH V+PL TAVGAEV HSFSTN+N ITVGTQH LDPLT++KAR+NN G ASAL+QHEWRPKSLFT+SGEVDTK+++K AKFGLALALKP Sbjct: 77 LFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALALKP 276
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 7.182e-86 Identity = 154/200 (77.00%), Postives = 184/200 (92.00%), Query Frame = 3 Query: 6 LFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 ++TTITVDEPAPGLKTI SF VPDQ+SGKVELQYLH+YAGI+TS+GLTA+P+VNFS V G N ++LGTDLSFD+ +GNFTKCNAGLSF+++DLIASL LN+KGD+++ASYYH V P+ TAVGAE+ HSFS+N+NT+T+GTQH+LDPLTT+KARVN+ G ASALIQHEWRPKSLFTISGEVDT+AIEKSAK GLA+ALKP Sbjct: 77 VYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 304.679 bits (779), Expect = 3.688e-82 Identity = 154/197 (78.17%), Postives = 173/197 (87.82%), Query Frame = 3 Query: 15 TITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 T TVDE APGL++I SFKVPDQ SGKVELQYLH+YAGISTS+GLT NP VNFS VIG+NVL++GTD+SFD+KSGNFTK NAGLSF DLIASL +N+KGD L ASYYH VNPL TAVGAEV H S+ D+TITVGTQH LDPLT++KARVN+AGIASALIQHEW+PKS FTISGEVDTK+I+KSAK GLALALKP Sbjct: 80 TATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 292.352 bits (747), Expect = 1.894e-78 Identity = 147/200 (73.50%), Postives = 167/200 (83.50%), Query Frame = 3 Query: 6 LFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 LFTTITV+EPAPG+K ILSFKVP+Q SGKVELQYLH+YAGIS+SVGL ANPIVNFS+VIGTN L+ G D+SFD+K G TK NA ++F DLI SL LN KGD L+ASYYH +NPL TAVG ++ H FST +NT T+GTQH LDPLTT+K RV N+G ASALIQHEWRPKSL TIS EVDTKAIEKSAK GL+LALKP Sbjct: 77 LFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLALKP 276
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 287.73 bits (735), Expect = 4.666e-77 Identity = 141/197 (71.57%), Postives = 168/197 (85.28%), Query Frame = 3 Query: 12 TTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVN-PLTAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 TT+TVDE PGLK+ILSF VPDQRSGK ELQY HDYAG+S S+GLTA+P+VN S+V GT L++G D+S D+ +GN TK NAGLSF+N DLIASLNLNNKGDSL ASYYH VN TAVGAE+ HSFS+N+N++T GTQH LDPLT +KAR NN+G ASAL+QHEWRPKS++TIS EVDTKAI+KS+K G+A+ALKP Sbjct: 78 TTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP 274
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 286.574 bits (732), Expect = 1.039e-76 Identity = 138/198 (69.70%), Postives = 165/198 (83.33%), Query Frame = 3 Query: 6 LFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 L TT+T DEPAPGLK I+ K+PD +SGK E+QY HDYAGISTSVG TA PIVNFS V+GTN LSLGTD++++++SGNF NAG +F DL ASL LN+KG+ L ASYY V+P T VGAE+ H+F+T +N ITVGTQH LDPLTT+KARVNNAG+A+ALIQHEWRPKS FT+SGEVD+KAI+KSAK G+ALALKP Sbjct: 77 LLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.405e-73 Identity = 140/200 (70.00%), Postives = 165/200 (82.50%), Query Frame = 3 Query: 6 LFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL-TAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 599 + TTIT D+ APGLKTILSF VPDQ+SGKVELQYLHDYAGI+ S+GLTANP+VN S GT+ L++G D+S D+ + NF K NA LS+ N DLIASLNLNNKGDSL ASYYH V TAVGAE+ HSFS+N+N++T GTQH LDPLT +KAR+NN+G ASALIQHE+ PKSL TIS EVDTKAIEKS+K G+A+ALKP Sbjct: 76 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIALKP 275
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.402e-65 Identity = 126/200 (63.00%), Postives = 155/200 (77.50%), Query Frame = 3 Query: 6 LFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFV--NPLTAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALK 596 L TTITVDE PGLK+I++ VPDQRSGK+E QYLH+YAG++ SVGL +NP+VN S G+ LS+G D+SFD+ + +FTK NA LS + DLIASL+LNN GD+L ASYYH V + TAVGAE+ HS S N++T+ G+QH LDP TT+K R NN G+ASAL+QHEWRPKS TISG+VDTKAIEKS K GL+L LK Sbjct: 77 LLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLK 276
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC2_XENLA (Voltage-dependent anion-selective channel protein 2 OS=Xenopus laevis GN=vdac2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 55/197 (27.92%), Postives = 83/197 (42.13%), Query Frame = 3 Query: 27 DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSA-KFGLALALK 596 D+ A GLK L+F ++SGKV+ Y +Y + V A P ++ SAV+G G ++FDS TK N + + D N+N+ G A S Y V+ + + N + ++ LD + A+VNN+ + RP T+S VD K I K GL L L+ Sbjct: 88 DQIAKGLK--LTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVND-GSEFAGSIYQKVSDKMETAVNLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNNSSLVGVGYTQTLRPGVKLTLSALVDGKNINAGGHKLGLGLELE 281
BLAST of CN187669 vs. ExPASy Swiss-Prot
Match: VDAC_DROME (Voltage-dependent anion-selective channel OS=Drosophila melanogaster GN=porin PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 53/203 (26.11%), Postives = 91/203 (44.83%), Query Frame = 3 Query: 6 LFTTITV-DEPAPGLKTILSFKVPDQ---RSGKVELQYLHDYAGISTSVGLTAN-PIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTNDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSA-KFGLALALK 596 LFT + V D+ GLK L Q ++GK ++ Y H+ + V + P++N SAV+G G +FD++ T N L + D + +N+ G + S + + VG ++ + T++ +G ++ LD +++A+VNNA Q + R T+S VD K K G+ L L+ Sbjct: 80 LFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLVDGKNFNAGGHKIGVGLELE 281 The following BLAST results are available for this feature:
BLAST of CN187669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187669 ID=CN187669; Name=CN187669; organism=Citrus sinensis; type=EST; length=775bpback to top |