FC921788

Overview
NameFC921788
Unique NameFC921788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4978 contig Csv1_Contig4978:761..1121. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.251e-22
Identity = 57/117 (48.72%), Postives = 72/117 (61.54%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRLA 353
            PKGSHVL   + +GRNP+VW  P KF PER + +       V+L E++            CMG+ +GS M+ +LLARL+QGF W    G+ KID+SESK DL MAKP  A A PRLA
Sbjct:  411 PKGSHVLISRMGIGRNPSVWDKPHKFDPERHLST----NTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAKPLYAVATPRLA 523          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 7.252e-22
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRLAA 356
            PKGSHV+     LGRNP VW +PL+F P+R + +       V L E +            C+  +LG+ MSV+L  RLLQGF WS P+G E +DLSESK D  MA P    A+PRL A
Sbjct:  436 PKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASD---VALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSESKSDTFMATPLVLHAEPRLPA 550          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.297e-18
Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRL 350
            PKGS VL     LGRNP VW DPL F PER +         V L E +            C   ALG+ ++ +LLARLLQGF W  P  E +++L ES +D+ +AKP     + RL
Sbjct:  422 PKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVELMESSHDMFLAKPLVMVGELRL 533          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.414e-17
Identity = 50/117 (42.74%), Postives = 61/117 (52.14%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRLA 353
            PKGSH+      LGRNP +WKDPL + PER +   D     V L ETE            C+G+ +G+ M V+LLAR LQGF W        + L E    LLMAKP     +PRLA
Sbjct:  414 PKGSHIHVCRPGLGRNPKIWKDPLVYKPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCIGVKVGTIMMVMLLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLHLSVEPRLA 529          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.118e-17
Identity = 45/107 (42.06%), Postives = 58/107 (54.21%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKP 323
            PKGS VL     LGRNP VW DPL F PER +         V L E +            C   ALG+ ++ ++LARLLQGF W  P  E +++L ES +D+ +AKP
Sbjct:  421 PKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVELMESSHDMFLAKP 523          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.174e-17
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRLAAE 359
            PKGS VL     LGRNP VW DPL F PER +         V L E +            C   ALG+ ++ ++LARLLQGF+W     E +++L ES +D+ ++KP     + RL+ +
Sbjct:  423 PKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVLVGELRLSED 537          
BLAST of FC921788 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.198e-16
Identity = 48/118 (40.68%), Postives = 61/118 (51.69%), Query Frame = 3
Query:    3 PKGSHVLPFPIRLGRNPNVWKDPLKFIPERPIGSVDHPYPPVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLMAKPFSARAKPRLAA 356
            PKGSH+      LGRNP +WKDPL + PER +   D     V L ETE            C+G+ +G+ M  ++LAR LQGF W        + L E    LLMAKP     +PRLA+
Sbjct:  413 PKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEEDDASLLMAKPLLLSVEPRLAS 529          
The following BLAST results are available for this feature:
BLAST of FC921788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
C79A2_ARATH4.251e-2248.72Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79A1_SORBI7.252e-2245.76Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79B1_SINAL8.297e-1841.38Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79F1_ARATH2.414e-1742.74Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C79B2_ARATH4.118e-1742.06Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79B3_ARATH9.174e-1737.82Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79F2_ARATH1.198e-1640.68Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionC06052D03T7 RindPdigS Citrus sinensis cDNA clone C06052D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921788 ID=FC921788; Name=FC921788; organism=Citrus sinensis; type=EST; length=361bp
TTCCCAAAGGCAGTCACGTTCTGCCCTTTCCAATACGGCTTGGCCGGAAC
CCTAACGTCTGGAAAGATCCATTGAAATTCATACCTGAACGTCCTATTGG
TTCAGTGGACCATCCTTATCCTCCAGTAGAGTTGGCGGAAACAGAATTAA
GATTCCTTTCATTCCGCAGAGGAAGGCGCAGTTGTATGGGCATGGCACTC
GGCTCTGAGATGTCTGTAGTGCTTTTGGCAAGGCTTCTTCAAGGGTTTGA
ATGGAGCGCGCCATCGGGTGAGGAGAAGATTGACCTCTCCGAATCAAAAT
ACGACCTCCTTATGGCTAAACCATTTTCTGCACGTGCAAAGCCCCGGTTG
GCTGCTGAGTT
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