CN187648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 5.135e-92 Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTGKYVFGV+DTLKALE+GAVE LIVWENLDINRY LKN+ TGEIVIKHL +DQE NQSNF DA T+AELEVQEK LLEWFANEYK+FGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+R++DELS DG VYEDSD Sbjct: 246 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDINRYELKNNTTGEIVIKHLGKDQENNQSNFHDAETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDMRTFDELS-DGEVYEDSD 435
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 4.069e-89 Identity = 161/191 (84.29%), Postives = 178/191 (93.19%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTGKYVFGV+DTLKALE+GA+E LIVWENLDINRY LKNS TGE+V+KH +DQE++ SNF D+ T+AELEVQEK LLEWFANEYK+FGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+R++DELSD VYEDSD Sbjct: 245 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVEDTLKALEMGAIETLIVWENLDINRYELKNSTTGEMVVKHFGKDQESDTSNFHDSETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDMRTFDELSDT-EVYEDSD 434
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 2.162e-82 Identity = 151/189 (79.89%), Postives = 169/189 (89.42%), Query Frame = -2 Query: 207 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYED 773 L AKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEKRLIGKYFEEISQDTGKYVFGV+DTL ALE GA+E LIVWENLDINRYV+KNSATGE VIKHLN++QEAN NF+ A + L+V+EK SLLEW ANEY++FGC+LEFVTNKSQEGSQFCRGFGGIGGILRYQLD+ ++D S+DG +D Sbjct: 247 LAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDMTAFD--SEDGEALDD 433
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.423e-70 Identity = 130/189 (68.78%), Postives = 154/189 (81.48%), Query Frame = -2 Query: 207 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYED 773 LQ KIL +VDVSYGGENGFNQAIELSAE+LSNVKFIQEK+LIG+YF+EISQDTGKY FGVDDTLKALE+GAVEILIVWENLD RYVLKN T E I L DQE ++++F D T E+E+ E SLLEWFAN YK+FG +LE VT++SQEGSQF +GFGGIGG+LRY++D + + DD +Y+D Sbjct: 246 LQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLKALEMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQEKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQGMEFNDDDPDLYDD 434
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 4.097e-65 Identity = 124/192 (64.58%), Postives = 151/192 (78.65%), Query Frame = -2 Query: 207 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG-EIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRS--YDELSDDGGVYED 773 LQ+K++ +VDVSYGGENGFNQAIEL+AE L NVKFIQEK+LIG+YF+EISQDTGKY FGV+DTL+ALELG+VE LI WENLDI RYVLKN A + HL +QE ++S+F D + E+E+ E LLEW AN YK FG +LE +T+KSQEGSQF RGFGGIGGILRY++D +S DEL +DG +D Sbjct: 246 LQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDELDNDGFDLDD 437
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL T E I +L +QE ++S+F D T E E+ E LLEWFAN YK+FG +LE VT+KSQEGSQF +GFGGIGGILRY++D + + D ++ D Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDD 436
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL T E I +L +QE ++S+F D T E E+ E LLEWFAN YK+FG +LE VT+KSQEGSQF +GFGGIGGILRY++D + + D ++ D Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDD 436
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4) HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL T E I +L +QE ++S+F D T E E+ E LLEWFAN YK+FG +LE VT+KSQEGSQF +GFGGIGGILRY++D + + D ++ D Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDD 436
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_MESAU (Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus auratus GN=ETF1 PE=1 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL T E I +L +QE ++S+F D T E E+ E LLEWFAN YK+FG +LE VT+KSQEGSQF +GFGGIGGILRY++D + + D ++ D Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDD 436
BLAST of CN187648 vs. ExPASy Swiss-Prot
Match: ERF1_HUMAN (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 201 LQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEANQSNFRDAATSAELEVQEKTSLLEWFANEYKQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSYDELSDDGGVYEDSD 773 LQ+K+L +VD+SYGGENGFNQAIELS E+LSNVKFIQEK+LIG+YF+EISQDTGKY FGV+DTLKALE+GAVEILIV+ENLDI RYVL T E I +L +QE ++S+F D T E E+ E LLEWFAN YK+FG +LE VT+KSQEGSQF +GFGGIGGILRY++D + + D ++ D Sbjct: 246 LQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDD 436 The following BLAST results are available for this feature:
BLAST of CN187648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187648 ID=CN187648; Name=CN187648; organism=Citrus sinensis; type=EST; length=774bpback to top |