CX675458

Overview
NameCX675458
Unique NameCX675458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4627 contig Csv1_Contig4627:2..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 6.196e-58
Identity = 109/209 (52.15%), Postives = 145/209 (69.38%), Query Frame = 3
Query:   30 TLIKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAP-IQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            T +K++G   ST  ARV+ CL E   ++ +V VD    EHK P  L +NPFGQIP  +DGDL LFESRA+  Y+  K+K    DL+R  +L+EAA+V VW EVE+ Q++ AI+PIVYE  + P ++G   +Q V+D + EKL KVL+VYEA+LS + YLAGDF S ADL+H PYT+YFM TP AS+     HVKAWWE + +RP+ KK+
Sbjct:    2 TPVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 210.305 bits (534), Expect = 7.089e-54
Identity = 103/206 (50.00%), Postives = 140/206 (67.96%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            +KLYGA +S    R  T L E   D+ +VP++  + EHK P  L +NPFGQ+P L+DGDL LFESRA+  Y A K K    +L+R  +L+EAA+V VWIEVE+ Q+  A+ PI+++  ++P+ G + DQ V+D NLEKL KVL+VYEA+L+  KYLAGDF SLADL+H+  T     TP AS++    HVKAWW  +  RP+ +KV
Sbjct:    4 MKLYGAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKV 206          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 207.994 bits (528), Expect = 3.518e-53
Identity = 106/206 (51.46%), Postives = 140/206 (67.96%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHH-LPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 650
            +KLYG P+S    RV T L+EK +DF +VPVDL +  HKQP FLA NPFGQIP L DGD  LFESRA+  Y+A K+   GTDL+       AA ++VW+EVES  FHP  +P+V++  V P+ G +PD  V++ + E+L+KVLDVYEA L+  KYLAGD ++LAD +H L       + P    ++ R HVKAWWE I++RPAF+K
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLL--PATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQK 207          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.478e-51
Identity = 98/205 (47.80%), Postives = 135/205 (65.85%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 650
            IK++G+P+ST T RV  CL EK +DF LVPVD+ S EHK+ P+L+ NPFGQ+P  EDGDL LFESRA+T Y+A  + + G  LI   D K+  ++ VW+EVE Q+F P  + + +E  + PI G + D   +  +  +LSKVLD+YE +L+ +KYL GD ++L DLHH+P  YY M T    +   R  V AW  DI +RPA+ K
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQ-DPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVK 206          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.478e-51
Identity = 100/207 (48.31%), Postives = 141/207 (68.12%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQ-GKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            +KLYG+ +S    R +  L E   ++ +VP+D    EHK P  LA+NPFGQ+P L+DGDL L+ESRA+  YV  K K    +L++  DLKE+A+V VW+EVES Q+ PA+ PI+++  + P+  G  PD+ V++ NLEKL KVL+VYEA+L+  KYLAGD+ S+ADL H+  T     TP AS++    HVKAWW D+ +RP+ +KV
Sbjct:    4 MKLYGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKP---ELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKV 207          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.788e-50
Identity = 96/205 (46.83%), Postives = 133/205 (64.88%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 650
            +KL+G  +S    RV+  L EK +DF LVPV++ + +HK+ PF+  NPFGQ+P  EDGDL LFESRA+T Y+A  + + G  L+ + D K+ A++ VW+EVESQ+F P  + + +E  + P+ G   D   +  N EKL KVLDVYE++L  +KYL GD ++LADLHH P   Y M T   S+   R HV AW  DI +RPA+ K
Sbjct:    3 MKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLAN-DPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSK 206          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.788e-50
Identity = 96/212 (45.28%), Postives = 145/212 (68.40%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFK-EAGTDLIRHHD-LKEAALVKVWIEVESQQFHPAIAPIVYEY----FVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            +K++G P+ T  ARV+  L E   ++ LVP+D  + EHK+P  +  NPF ++P  +DGDL LFESRA+  Y+  K+   AG DL+  +  ++E A+V VW EVE+QQ++PAI+P+V+E     F+ P  G +P+Q V+D +LE+L  VL +YEA+L  ++YLAGD  + ADL+H+P+T+YFM TP A +  +   VKAWWE + +RPA ++V
Sbjct:    4 VKVFGHPMLTNVARVLLFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.788e-50
Identity = 96/205 (46.83%), Postives = 132/205 (64.39%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 650
            IK++G+P+ST T RV  CL EK +DF  VPVD+ S EHK+ P+L+ NPFGQ+P  EDGDL LFESRA+T Y+A  + + G  LI   D K+   + VW+EVE Q+F P    + +E  + PI G + D   +  +  +LSKVLD+YE +L+ +KYL GD ++L DLHH+P  YY M +    +   R  V AW  DI +RPA+ K
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQ-DPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVK 206          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.383e-49
Identity = 94/206 (45.63%), Postives = 136/206 (66.02%), Query Frame = 3
Query:   36 IKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            IK++G P ST T RV+  LHEK VDF  V V+L   EHK+ PF+ +NPFG++P  EDGD  +FESRA+T Y+A +F + G +L+     K+ A++ + IE+ES +F P  + +V+E  + P+ G + D+ V++    KL+KVLDVYE +L  +KYLA D ++L DLH +P   Y + TP   +  ER HV AW  DI+SRP+ +KV
Sbjct:    4 IKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTG--KDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKV 207          
BLAST of CX675458 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 1.807e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 3
Query:    9 SFSLIMTTLIKLYGAPVSTCTARVMTCLHEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKV 653
            S S+IM + IK++G P+ST T RV+  L+EK + F L+PVD+ +  HKQ   LA NPFGQIP LEDGDLTLFESRA+T Y+AE++ E G  LI     K  A   VW++VE QQF P  + + +E     + G + D   +     KL KVLDVYEA+L+ +++LAGD ++LADLHHLP  +Y + T    +   R  V  W + IS+RPA+ KV
Sbjct:   44 SSSIIMAS-IKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKV 257          
The following BLAST results are available for this feature:
BLAST of CX675458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GSTF1_ORYSJ6.196e-5852.15Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE7.089e-5450.00Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF3_MAIZE3.518e-5351.46Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF2_TOBAC1.478e-5147.80Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF2_ORYSJ1.478e-5148.31Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF_HYOMU2.788e-5046.83Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_WHEAT2.788e-5045.28Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF1_TOBAC2.788e-5046.83Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_ARATH1.383e-4945.63Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF6_ARATH1.807e-4947.44Glutathione S-transferase 6, chloroplastic OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62D06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62D06-H12-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675458 ID=CX675458; Name=CX675458; organism=Citrus sinensis; type=EST; length=654bp
GTTGCCTCTCTTTCTCACTAATAATGACGACGCTGATCAAGCTGTATGGA
GCTCCCGTGTCCACATGCACCGCGCGTGTGATGACTTGTCTCCATGAGAA
AGCCGTCGATTTCGCGCTCGTCCCGGTTGATCTTTTCTCCTGCGAGCACA
AGCAACCTCCTTTTCTTGCCAAGAATCCCTTCGGTCAGATTCCAGTTTTA
GAAGATGGCGATCTCACTTTATTTGAATCTAGAGCAATGACAGCATACGT
GGCTGAAAAATTCAAAGAAGCAGGCACGGATCTGATTAGGCACCACGACC
TGAAAGAAGCTGCATTGGTGAAGGTATGGATTGAAGTAGAATCACAGCAA
TTCCACCCAGCAATCGCTCCAATTGTTTATGAATACTTCGTGGCACCTAT
TCAAGGCAAATCACCTGACCAAGGTGTCATTGATGCCAACTTAGAAAAGC
TAAGCAAAGTGCTTGATGTGTATGAAGCCAAGCTTAGTAGCGCAAAGTAT
CTGGCTGGTGATTTTTACAGCTTGGCTGATTTGCACCATCTACCTTACAC
TTATTATTTTATGAAGACTCCCTGTGCTTCAATCATCAGTGAACGCGCAC
ATGTTAAGGCATGGTGGGAGGATATTTCTTCTAGGCCTGCTTTCAAGAAA
GTGT
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