CX675457

Overview
NameCX675457
Unique NameCX675457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4627 contig Csv1_Contig4627:92..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = -3
Query:  139 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAP-IQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSEGM 708
            E   ++ +V VD    EHK P  L +NPFGQIP  +DGDL LFESRA+  Y+  K+K    DL+R  +L+EAA+V VW EVE+ Q++ AI+PIVYE  + P ++G   +Q V+D + EKL KVL+VYEA+LS + YLAGDF S ADL+H PYT+YFM TP AS+     HVKAWWE + +RP+ KK++  M
Sbjct:   24 EVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 196.823 bits (499), Expect = 9.422e-50
Identity = 94/187 (50.27%), Postives = 130/187 (69.52%), Query Frame = -3
Query:  148 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVS 708
            E   D+ +VP++  + EHK P  L +NPFGQ+P L+DGDL LFESRA+  Y A K K    +L+R  +L+EAA+V VWIEVE+ Q+  A+ PI+++  ++P+ G + DQ V+D NLEKL KVL+VYEA+L+  KYLAGDF SLADL+H+  T     TP AS++    HVKAWW  +  RP+ +KV+
Sbjct:   24 EAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVA 207          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 3.959e-48
Identity = 94/191 (49.21%), Postives = 132/191 (69.11%), Query Frame = -3
Query:  139 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQ-GKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSEGM 708
            E   ++ +VP+D    EHK P  LA+NPFGQ+P L+DGDL L+ESRA+  YV  K K    +L++  DLKE+A+V VW+EVES Q+ PA+ PI+++  + P+  G  PD+ V++ NLEKL KVL+VYEA+L+  KYLAGD+ S+ADL H+  T     TP AS++    HVKAWW D+ +RP+ +KV+  M
Sbjct:   24 EAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKP---ELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLM 211          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 189.889 bits (481), Expect = 1.152e-47
Identity = 96/187 (51.34%), Postives = 128/187 (68.45%), Query Frame = -3
Query:  154 HEKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHH-LPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 711
            +EK +DF +VPVDL +  HKQP FLA NPFGQIP L DGD  LFESRA+  Y+A K+   GTDL+       AA ++VW+EVES  FHP  +P+V++  V P+ G +PD  V++ + E+L+KVLDVYEA L+  KYLAGD ++LAD +H L       + P    ++ R HVKAWWE I++RPAF+K
Sbjct:   23 NEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPA--TASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQK 207          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.716e-47
Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = -3
Query:  145 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSE 708
            EK +DF LVPV++ + +HK+ PF+  NPFGQ+P  EDGDL LFESRA+T Y+A  + + G  L+ + D K+ A++ VW+EVESQ+F P  + + +E  + P+ G   D   +  N EKL KVLDVYE++L  +KYL GD ++LADLHH P   Y M T   S+   R HV AW  DI +RPA+ K  E
Sbjct:   23 EKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLAN-DPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 89/196 (45.41%), Postives = 134/196 (68.37%), Query Frame = -3
Query:  139 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFK-EAGTDLIRHHD-LKEAALVKVWIEVESQQFHPAIAPIVYEY----FVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSEGM 708
            E   ++ LVP+D  + EHK+P  +  NPF ++P  +DGDL LFESRA+  Y+  K+   AG DL+  +  ++E A+V VW EVE+QQ++PAI+P+V+E     F+ P  G +P+Q V+D +LE+L  VL +YEA+L  ++YLAGD  + ADL+H+P+T+YFM TP A +  +   VKAWWE + +RPA ++V + M
Sbjct:   24 EVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRVCKHM 219          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = -3
Query:  154 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKK 708
            EK +DF LVPVD+ S EHK+ P+L+ NPFGQ+P  EDGDL LFESRA+T Y+A  + + G  LI   D K+  ++ VW+EVE Q+F P  + + +E  + PI G + D   +  +  +LSKVLD+YE +L+ +KYL GD ++L DLHH+P  YY M T    +   R  V AW  DI +RPA+ K
Sbjct:   23 EKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQ-DPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVK 206          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 7.726e-44
Identity = 92/188 (48.94%), Postives = 124/188 (65.96%), Query Frame = -3
Query:  148 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFM-KTPCASIISERAHVKAWWEDISSRPAFKKVS 708
            EK V F  V VDL   E +QP +LA  PFG+IPVL DGD  +FESRA+  Y+AEK++  G DL+    ++E   V+ W++VE+  +HP +  +      AP+ G   D+ VI  + EKL++VLDVYEA+LS  +YLAGDF SLADL HLP+T Y +     A +I +R HV AWW+ ISSR A+K+VS
Sbjct:   22 EKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGK-TIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEVS 208          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.009e-43
Identity = 90/193 (46.63%), Postives = 125/193 (64.77%), Query Frame = -3
Query:  130 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFKEAGTDLIRHHDLKEAALVKVWIEVESQQFHPAIAPIVYEYFVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSEGMNFG 708
            E  VD+ LVP+     +H++P  LA+NPFG++PVLEDGDLTLFESRA+  +V  K K    +L+    L++ A+V VW+EVE+ Q  P    IV E   AP  G+  +Q V+D N+EKL KVL+VYEA+L++  YLAGDF SLADL      +  M T  A+++    HV AWW+ +++RPA  KV++ M  G
Sbjct:   26 EAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKP---ELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKVAQFMPVG 215          
BLAST of CX675457 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.009e-43
Identity = 87/196 (44.39%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  139 EKAVDFALVPVDLFSCEHKQPPFLAKNPFGQIPVLEDGDLTLFESRAMTAYVAEKFK-EAGTDLIRHHD-LKEAALVKVWIEVESQQFHPAIAPIVYEY----FVAPIQGKSPDQGVIDANLEKLSKVLDVYEAKLSSAKYLAGDFYSLADLHHLPYTYYFMKTPCASIISERAHVKAWWEDISSRPAFKKVSEGM 708
            E   ++ LVPVD  + EHK+P  +  NPF ++P  +DG+    +SRA+  Y+  K+   AG DL+  +  ++E A+V VW EVE+QQ++PAI+P+V+E     F+ P  G +P+Q V+D +LE+L  VL +YEA+L  ++YLAGD  S ADL+H+P+T+YFM TP A +  E   VKAWWE + +RPA ++V + M
Sbjct:   24 EVGAEYELVPVDFVAGEHKRPQHVQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRVCKHM 219          
The following BLAST results are available for this feature:
BLAST of CX675457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GSTF1_ORYSJ2.028e-5252.36Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE9.422e-5050.27Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_ORYSJ3.959e-4849.21Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_MAIZE1.152e-4751.34Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF_HYOMU5.716e-4747.87Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_WHEAT6.320e-4645.41Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_TOBAC9.126e-4547.03Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF3_ARATH7.726e-4448.94Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF4_MAIZE1.009e-4346.63Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF2_WHEAT1.009e-4344.39Glutathione S-transferase 2 OS=Triticum aestivum G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_62D06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62D06-H12-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675457 ID=CX675457; Name=CX675457; organism=Citrus sinensis; type=EST; length=713bp
TTTGAACAAGGCACCGCAATTTTTCTAATTTAAATATTCCATTACATCAA
TGTAAAATCATCACGCAACCAATTTGTGGATATTACACTACTACGGTACC
CCATTTTTCTTTTTCCTTTTTTATTTTTCACCAAAATTCATACCCTCGGA
CACTTTCTTGAAAGCAGGCCTAGAAGAAATATCCTCCCACCATGCCTTAA
CATGTGCGCGTTCACTGATGATTGAAGCACAGGGAGTCTTCATAAAATAA
TAAGTGTAAGGTAGATGGTGCAAATCAGCCAAGCTGTAAAAATCACCAGC
CAGATACTTTGCGCTACTAAGCTTGGCTTCATACACATCAAGCACTTTGC
TTAGCTTTTCTAAGTTGGCATCAATGACACCTTGGTCAGGTGATTTGCCT
TGAATAGGTGCCACGAAGTATTCATAAACAATTGGAGCGATTGCTGGGTG
GAATTGCTGTGATTCTACTTCAATCCATACCTTCACCAATGCAGCTTCTT
TCAGGTCGTGGTGCCTAATCAGATCCGTGCCTGCTTCTTTGAATTTTTCA
GCCACGTATGCTGTCATTGCTCTAGATTCAAATAAAGTGAGATCGCCATC
TTCTAAAACTGGAATCTGACCGAAGGGATTCTTGGCAAGAAAAGGAGGTT
GCTTGTGCTCGCAGGAGAAAAGATCAACCGGGACGAGCGCGAAATCGACG
GCTTTCTCATGGA
back to top