EY665926

Overview
NameEY665926
Unique NameEY665926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665926 vs. ExPASy Swiss-Prot
Match: FUSC_BURCE (Fusaric acid resistance protein fusC OS=Burkholderia cepacia GN=fusC PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.395e-23
Identity = 69/162 (42.59%), Postives = 91/162 (56.17%), Query Frame = -2 
Query:   67 MRNGLYQRFGVFALLVTDGLXXXXXXXXXXXSNVRFIAEAVGLEGLRSITVFEDPHMRRRNGRLTRLNSEFMSITTRFNALHQLLERLRSQEADHVVAAIKPGLQDLAELLDGFSGRALTSPDAARLANQLNTYKEGLPAKVRSLRTSFQESQPSDAEQLDF 552
            MR  + +RFG F   V   L            + RF A  VG E  RS+ VFEDP  R R+GRL RLNSEFMS ++RF+ALHQL+ RL +  A   + AI+P  +++A LL        TS DAA  A QL  +++ LP ++R+ R    E+QP D   LDF
Sbjct:   33 MRTTVRKRFGSFVDYVASALSGQLDRAHIETIHTRF-AYVVGFEAARSMAVFEDPDTRMRSGRLARLNSEFMSASSRFHALHQLMNRLHAAGAQAAIDAIEPYFREIAPLLTRNGEPVRTSIDAAHSAEQLLAWRDALPRRIRATRAEL-ETQP-DFPLLDF 191
The following BLAST results are available for this feature:
BLAST of EY665926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FUSC_BURCE2.395e-2342.59Fusaric acid resistance protein fusC OS=Burkholder... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-007-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665926 ID=EY665926; Name=EY665926; organism=Citrus sinensis; type=EST; length=943bp
GCGGGACCCGCGGGAACGGTCCGGATTCCCGGGTCGACAAGCGGTACAGC
AGTTCGTAGGCGGTGTGAAATCCAGCTGCTCGGCGTCGCTGGGCTGACTT
TCCTGGAAGCTCGTGCGCAGGCTGCGTACCTTGGCGGGCAGGCCTTCCTT
ATAGGTATTCAACTGATTGGCCAGGCGCGCCGCGTCGGGGCTGGTGAGGG
CACGGCCGGAAAAACCGTCGAGCAATTCCGCGAGGTCTTGCAGGCCGGGT
TTGATGGCGGCCACCACGTGATCGGCCTCTTGGCTGCGCAGGCGTTCGAG
CAATTGGTGCAAGGCATTGAAGCGAGTAGTGATGCTCATGAACTCGCTGT
TCAAGCGCGTCAGCCGACCATTGCGCCGACGCATGTGCGGGTCTTCGAAC
ACCGTGATGCTGCGCAGCCCTTCCAGGCCCACGGCTTCGGCGATAAAGCG
TACGTTGCTGCGTTCAAACCCTTCACGCTCGCTGCGACCGCGCAGACCGT
CGGTGACCAACAGCGCAAACACACCGAAACGTTGGTACAGACCGTTGCGC
ATCGCGGCGCTGGCGGGTTTGCGGCAGGAATCCGGTGCCTGAACCACGTG
GAAGCAAAAAATCCCCAAACAAAATCCCCACGACCCGGCCCCACGCGCCG
CCCATGACAGGTGCCCATTCGGTATGGGCCCACGGGCCGGAACACCCAAC
ATTCGCCCCCGGGGGTTTCCCTGCAAACCACAAGAACCCGACGGCGGTAA
CATTTGAAATAGGTAGAACCCCCAGACAACTAAAACAATCAAACAGAAAG
ACACCAATAGACAAAAAAGTACAATCACCCACCGGAACACAACACAACCC
AAACGCATATAAAAGATTCAACCACAACCGCATCGACCTAATCTTGTGCT
AACTACGACAAATAAGCGTACCACACGAATTTACAGATGACAT
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