CX675447

Overview
NameCX675447
Unique NameCX675447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6077 contig Csv1_Contig6077:48..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL2_MOUSE (DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 8.388e-46
Identity = 89/215 (41.40%), Postives = 137/215 (63.72%), Query Frame = 2
Query:   92 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I RDTW+
Sbjct:    1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLLEHHKRSIPRDTWN 214          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL2_HUMAN (DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.441e-45
Identity = 89/215 (41.40%), Postives = 133/215 (61.86%), Query Frame = 2
Query:   92 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            MHKL  S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  D + LE LY RYKDP  +  I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF+ G+  LG DS++K +  +  +  ELKD  KF++ Y F F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I RDTW+
Sbjct:    1 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWN 214          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL1_HUMAN (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.437e-45
Identity = 91/215 (42.33%), Postives = 134/215 (62.33%), Query Frame = 2
Query:   92 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWN 214          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL1_CHICK (DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.066e-44
Identity = 90/215 (41.86%), Postives = 133/215 (61.86%), Query Frame = 2
Query:   92 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+
Sbjct:    1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWN 214          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL1_MOUSE (DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.698e-44
Identity = 90/215 (41.86%), Postives = 133/215 (61.86%), Query Frame = 2
Query:   92 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY RYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWN 214          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCN1L_DROME (DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.266e-40
Identity = 81/211 (38.39%), Postives = 132/211 (62.56%), Query Frame = 2
Query:   92 MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRHLEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWS 715
            M+KL S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI G+  LGIDS+DK + ++  +  EL D  KF++ Y+F F +AK+ GQK + L+ AI  W ++ + + +  +D WCQFL+ KH +AISRDTW+
Sbjct:    1 MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGR-FKFLDIWCQFLEEKHKRAISRDTWN 210          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL3_XENTR (DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 78/219 (35.62%), Postives = 121/219 (55.25%), Query Frame = 2
Query:   95 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWS 715
            HK S S++D   + +SI G AS +  +   K  D  LE       G       Q     L+  + +EEL+ RYKD   D IL +G+   CNDL VDP +  +LV++W  +AATMC+F+++EF  G +++  D ++    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +W+L+F + +  ++D W  FL    +  K ISRDTW+
Sbjct:   28 HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAELSSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRREFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNKPLILDQWLDFLTENPSGIKGISRDTWN 243          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30
Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 2
Query:  260 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWS 715
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL    +  K ISRDTW+
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWN 244          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL3_PONAB (DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30
Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 2
Query:  260 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWS 715
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL    +  K ISRDTW+
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWN 244          
BLAST of CX675447 vs. ExPASy Swiss-Prot
Match: DCNL3_MOUSE (DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30
Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 2
Query:  260 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWS 715
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL    +  K ISRDTW+
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWN 244          
The following BLAST results are available for this feature:
BLAST of CX675447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
DCNL2_MOUSE8.388e-4641.40DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=... [more]
DCNL2_HUMAN2.441e-4541.40DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=... [more]
DCNL1_HUMAN5.437e-4542.33DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
DCNL1_CHICK2.066e-4441.86DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE... [more]
DCNL1_MOUSE2.698e-4441.86DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=... [more]
DCN1L_DROME5.266e-4038.39DCN1-like protein OS=Drosophila melanogaster GN=CG... [more]
DCNL3_XENTR9.955e-3135.62DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1... [more]
DCNL3_RAT1.300e-3041.03DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL3_PONAB1.300e-3041.03DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=... [more]
DCNL3_MOUSE1.300e-3041.03DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62C09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62C09-F18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675447 ID=CX675447; Name=CX675447; organism=Citrus sinensis; type=EST; length=720bp
CAAAAGCCGAAGAAGCCCTAGAGTTCGTCTCGAGAGAGAGCTTTCTCATT
CATCAGCATAAAACCAAATATCAAATTCACAAGCTCCCGAGATGCATAAG
CTGAGTAGAAGTAACCGGGACAAACTCCAACAATTTGTCTCGATAACTGG
GGCAAGCGAAAAAGCTGCTCTTCAGGCTTTGAAGGCTAGTGACTGGCATC
TTGAAGGAGCATTTGATGTATTCTATAGCCAACCTCAATCAAAATCACTA
ACTGATACCAGACATTTGGAGGAGCTTTATAACAGATATAAAGATCCATA
TCTTGATATGATTCTGGTTGACGGTATCACTCTCCTGTGCAATGACCTTC
AGGTGGATCCTCAAGATATAGTTATGTTAGTTGTTTCATGGCACATGAAA
GCTGCTACAATGTGTGAATTCTCAAAGCAGGAGTTCATAGGTGGATTGCA
ATCACTAGGGATAGATTCTCTGGATAAGTTCCGTGAAAGGATATCATTCA
TGCGGGCTGAGCTGAAAGATGAACAAAAATTCCGTGAGATATACAACTTT
GCATTTGCCTGGGCAAAAGAAAAGGGTCAGAAATCTCTGGCATTGGACAC
TGCAATCGGAATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCACTAG
TTGATCATTGGTGCCAGTTCTTGCAGGCTAAGCATAATAAAGCAATCTCA
AGGGACACATGGTCTCAGCT
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