CX675446

Overview
NameCX675446
Unique NameCX675446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCN1L_DROME (DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 7.082e-42
Identity = 76/167 (45.51%), Postives = 111/167 (66.47%), Query Frame = -3
Query:  315 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEYLTEN 815
            G+     DL + P   ++L+++W   A   CEFS+ EFI G+  LGIDS DK + ++  +  EL D  KF++ Y+F F +AK+ GQK + L+ AI  W ++ + + +  +D WCQFL+ KH +AISRDTW+ LL+FA  +D  +SNYD+EGAWP LID+FVE+  EN
Sbjct:   81 GVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGR-FKFLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQEN 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL2_MOUSE (DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 7.830e-41
Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = -3
Query:  327 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 821
            +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I RDTW+ LL+F   +   LSNYD EGAWP LID+FVEY
Sbjct:   83 IDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEY 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL2_HUMAN (DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.336e-40
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = -3
Query:  327 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 821
            VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF+ G+  LG DS +K +  +  +  ELKD  KF++ Y F F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I RDTW+ LL+F   +   +SNYD EGAWP LID+FVEY
Sbjct:   83 VDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEY 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL1_MOUSE (DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.131e-39
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = -3
Query:  327 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 821
            +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS +K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+ LL+F+  +   +SNYD EGAWP LID+FVE+
Sbjct:   83 IDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSSMIADDMSNYDEEGAWPVLIDDFVEF 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL1_HUMAN (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.131e-39
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = -3
Query:  327 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 821
            +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS +K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+ LL+F+  +   +SNYD EGAWP LID+FVE+
Sbjct:   83 IDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEF 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL1_CHICK (DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 74/165 (44.85%), Postives = 108/165 (65.45%), Query Frame = -3
Query:  327 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 821
            +DGI   C+DL +DP  I +L+++W  +AAT CEFSK EF+ G+  LG DS +K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I +DTW+ LL+F+  +   +SNYD EGAWP LID+FVE+
Sbjct:   83 IDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEF 246          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.905e-36
Identity = 69/164 (42.07%), Postives = 111/164 (67.68%), Query Frame = -3
Query:  327 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 818
            +G+   C D+ V+P++I+MLV++W ++A +M  F+K+E++ G+ SL  D  +K + R  F+R++L D   F+ IY +AF +A++K Q+SL +DTA  M  LL   + WPL   + Q+L+    + +++D W  +LEF+RTV   LSNYD +GAWP L+DEFVE+
Sbjct:   68 EGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 230          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.905e-36
Identity = 69/164 (42.07%), Postives = 111/164 (67.68%), Query Frame = -3
Query:  327 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 818
            +G+   C D+ V+P++I+MLV++W ++A +M  F+K+E++ G+ SL  D  +K + R  F+R++L D   F+ IY +AF +A++K Q+SL +DTA  M  LL   + WPL   + Q+L+    + +++D W  +LEF+RTV   LSNYD +GAWP L+DEFVE+
Sbjct:   68 EGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 230          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.207e-35
Identity = 68/164 (41.46%), Postives = 111/164 (67.68%), Query Frame = -3
Query:  327 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 818
            +G+   C D+ V+P++I+MLV++W ++A +M  F+K+E++ G+ SL  D  +K + +  F+R++L D   F+ IY +AF +A++K Q+SL +DTA  M  LL   + WPL   + Q+L+    + +++D W  +LEF+RTV   LSNYD +GAWP L+DEFVE+
Sbjct:   68 EGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 230          
BLAST of CX675446 vs. ExPASy Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.207e-35
Identity = 68/164 (41.46%), Postives = 111/164 (67.68%), Query Frame = -3
Query:  327 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSXDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 818
            +G+   C D+ V+P++I+MLV++W ++A +M  F+K+E++ G+ SL  D  +K + +  F+R++L D   F+ IY +AF +A++K Q+SL +DTA  M  LL   + WPL   + Q+L+    + +++D W  +LEF+RTV   LSNYD +GAWP L+DEFVE+
Sbjct:   67 EGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 229          
The following BLAST results are available for this feature:
BLAST of CX675446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DCN1L_DROME7.082e-4245.51DCN1-like protein OS=Drosophila melanogaster GN=CG... [more]
DCNL2_MOUSE7.830e-4146.06DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=... [more]
DCNL2_HUMAN1.336e-4046.06DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=... [more]
DCNL1_MOUSE1.131e-3945.45DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=... [more]
DCNL1_HUMAN1.131e-3945.45DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
DCNL1_CHICK4.297e-3944.85DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE... [more]
DCNL5_RAT9.905e-3642.07DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL5_MOUSE9.905e-3642.07DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=... [more]
DCNL5_HUMAN2.207e-3541.46DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]
DCNL5_BOVIN2.207e-3541.46DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62C09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62C09-F18-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675446 ID=CX675446; Name=CX675446; organism=Citrus sinensis; type=EST; length=823bp
TTCAAAACTTGTCCAAACTTACAAGAATTATTGACAACAAAAGAGAGGGA
ATAGTTATGCAAATAATTAATTTCACTAGAAATGCAAATATCATCATCAA
CAATCCCATTGACTGAGAATGTTGAATACCCAATTGTCAACAGATAAATA
AGGTCATGAACAAACAAGTGTTTTTTGGGGAAGTCATTATTTTCCGAAAC
AAACAAATTTCATTGACAGGGGAGCACGACTACAATCACACTAGAGAAAG
ATGTTATCACTTTGTAGCATAATTAACCCACCAGCGTGGCTCATCATCGA
TTTTGAACAATGCCATTCTCAGTCAAGTATTCAACGAATTCATCAATAAG
ATAAGGCCATGCGCCTTCTGCATCATAGTTTGATAGTGCAGGGTCCACTG
TCCTTGCAAACTCCAATAGCTGAGACCATGTGTCCCTTGAGATTGCTTTA
TTATGCTTAGCCTGCAAGAACTGGCACCAATGATCAACTAGTGGCCACTG
CTTCTCAGCAAATAATAATTGCCACATTCCGATTGCAGTGTCCAATGCCA
GAGATTTCTGACCCTTTTCTTTTGCCCAGGCAAATGCAAAGTTGTATATC
TCACGGAATTTTTGTTCATCTTTCAGCTCAGCCCGCATGAATGATATCCT
TTCACGGAACTTATCCNGAGAATCTATCCCTAGTGATTGCAATCCACCTA
TGAACTCCTGCTTTGAGAATTCACACATTGTAGCAGCTTTCATGTGCCAT
GAAACAACTAACATAACTATATCTTGAGGATCCACCTGAAGGTCATTGCA
AAGGAGAGTGATACCGTCAACCA
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