CX675435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_RABIT (Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 ++ F L KC+ E+I+ + + G Y + + + G TH +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 31 AISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_MESAU (Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 50/191 (26.18%), Postives = 95/191 (49.74%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 ++ F L KC+ E+I+ + + G Y + + + G TH +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S++ + +A Q+++L+ FF+ KKL+ Sbjct: 31 AISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMLCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_BOVIN (Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14 Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 ++ F L KC+ E+I+ + + G Y + + + G TH +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 31 AISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_RAT (Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14 Identity = 50/188 (26.60%), Postives = 92/188 (48.94%), Query Frame = -1 Query: 239 FDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 802 F L KC+ E+I+ + + G Y + + + G TH +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 34 FHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_MOUSE (Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14 Identity = 50/188 (26.60%), Postives = 92/188 (48.94%), Query Frame = -1 Query: 239 FDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 802 F L KC+ E+I+ + + G Y + + + G TH +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 34 FHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTH---LKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_PONAB (Transmembrane emp24 domain-containing protein 10 OS=Pongo abelii GN=TMED10 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14 Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 ++ F L KC+ E+I+ + + G Y + + + G +H +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 31 AISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_HUMAN (Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14 Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 ++ F L KC+ E+I+ + + G Y + + + G +H +K+T G+ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 31 AISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSH---LKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: TMEDA_TAKRU (Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12 Identity = 50/197 (25.38%), Postives = 93/197 (47.21%), Query Frame = -1 Query: 239 SMRFDLTSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTV------KVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 811 S+ F L KC+ E+I+ + + G+Y + +E T V K+T ++ + + G FAFT + + CF S V + K GV +K++ ++AK ++ +E+EL++L D SI M++ N++TN+R+ S+ + +A Q+++L+ FF+ KKL+ Sbjct: 19 SISFFLPVNTRKCLREEIHKDVLVTGEYEI---SEQVVTVHTSSTVVGDGSIFKITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCFESKCTGRVPDQLVNLDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 212
BLAST of CX675435 vs. ExPASy Swiss-Prot
Match: ERV25_CANGA (Endoplasmic reticulum vesicle protein 25 OS=Candida glabrata GN=ERV25 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.658e-11 Identity = 50/206 (24.27%), Postives = 96/206 (46.60%), Query Frame = -1 Query: 239 LFSKFGESMRFDL---TSGHTKCVSEDINHNGMTVGKYGVVNPNEGYPLPDTHKLTVKVTSPYGNSYHQ-GDHVESGNFAFTAAEAGDYTACFW----SPDHNPPATVTVEFEWKTGVVSKDWTKVAKKGQVDMMELELKKLFDTVSSIHXXXXXXXXXXXXMQELNKTTNSRMASLGFISLVVCLSVAALQIWHLKTFFERKKLL 832 L + F ++RFDL + C+ + ++ G+ V+N + L D + L + V GN Y + + V AFTA + CF S N A +E + ++G ++DW K++ ++ +ELEL+K+ + I ++ N++TN R+ + + ++V S+ A Q+ +LK +F+ K ++ Sbjct: 8 LLAPFISALRFDLKAESKPEQMCIRDFVSE-----GELVVINIDTDGSLNDGNVLNLYVHDSNGNEYRRLKNFVGEQRIAFTAPATTSFDVCFENTLDSNRGNRNAKRAIELDIESGSQARDWNKISATEKLRPIELELRKIEELTDEIVDELNYLKNREERLRNTNESTNERVRNFSVLVIIVLTSLGAWQVNYLKNYFKSKHII 208 The following BLAST results are available for this feature:
BLAST of CX675435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675435 ID=CX675435; Name=CX675435; organism=Citrus sinensis; type=EST; length=832bpback to top |