CK938104

Overview
NameCK938104
Unique NameCK938104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK938104 vs. ExPASy Swiss-Prot
Match: Y4966_ARATH (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 2 
Query:  173 SYLWRKYADYVYTKWERTLIWDMIEPYRRPKSFTPLVSIYVAAFYTGVIAAAINEQLYKEKYWEDHPGEAVPLMRPTFYGGPWKVYKGDTL 445
            S LWRKYADY Y K+ER  +W+MIEPYRRPK+FT L++IYVAAFYTGVI AA+ EQLYKEK+WE+HPG+ VPLM+P FY GPW+VY+G+ +
Sbjct:    6 SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAI 96
The following BLAST results are available for this feature:
BLAST of CK938104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4966_ARATH4.133e-3770.33Uncharacterized protein At4g29660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004478_B06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938104 ID=CK938104; Name=CK938104; organism=Citrus sinensis; type=EST; length=621bp
GGGGGAGAGCAGCGAACTCCAAAGCGCTCCGAAGTCCAAACGCAATCCTG
CAGCGTGAATTGACACCCGCTGCTGAGTTGCGCCGCCGCTTCACGGCTGT
CACCACTGACCTTCAAAAGATATGGTAGGCAGCTTAGGTGGCGGAAGTCA
AAGGGGGAGGTTGGAAATGGCGAGTTACTTATGGAGAAAATACGCGGACT
ATGTGTACACAAAGTGGGAAAGAACACTAATTTGGGACATGATAGAGCCC
TACAGAAGACCCAAATCTTTCACACCCCTTGTCAGTATCTATGTTGCTGC
TTTCTACACTGGTGTGATTGCCGCTGCTATTAACGAGCAACTCTACAAGG
AGAAGTATTGGGAAGATCACCCTGGTGAAGCTGTGCCGCTCATGCGGCCA
ACATTTTATGGTGGTCCCTGGAAGGTTTACAAGGGGGATACCCTGCCGCA
AAATATGTGAATTGGAGTCGTGTTGAAGCTACTTCCTTTCTACTTGTGTT
TATTGTACAAAGGTCACAGGTTTTGGTGGTACGTAGTGATCAAATATTAT
TCTTGGTAAAAAATAACTTTCAGGTCGAAATGATGCATAGCTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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