CK938098

Overview
NameCK938098
Unique NameCK938098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.329e-36
Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 1
Query:  142 YPTSVSFGSLKVKAKLNDXXXXXXXXXXVVDESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQND 504
            YPT   F S +++++L             V +S++LSFYDLLG+ ESV+L EIKQAYKQ+ARKYHPDVSPPDRVEEYT RFIRVQEAYETLSDP  R LYDRDLSMG   +FS RR+ + D
Sbjct:   38 YPTRTRFSSTRIQSRLTHDDP--------VKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD 150          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  235 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.893e-12
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  235 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.472e-12
Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  253 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.217e-12
Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 1
Query:  253 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            +Y++LG+P + +  EI++AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.093e-11
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  256 YDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQ 498
            Y++LG+  + S  EIK+AY+++A+KYHPD++P D+  E  Q+F  + EAYE LSDP  RA YD+    G H AF     QQ
Sbjct:    7 YEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDK--EAEQKFKEINEAYEILSDPQKRAQYDQ---FG-HAAFEQGGSQQ 81          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.093e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  238 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQ 498
            S +  +Y++LG+P + S  EIK+AY+++ RKYHPD+      EE   +F  + EAY+ LSDP  R LYD    M  H AF     QQ
Sbjct:    4 STKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEE---KFKEINEAYQVLSDPEKRKLYD----MYGHAAFEGAGAQQ 83          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.733e-11
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  241 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            KE  FYD+LG+P + + VEIK+AY++ A KYHPD +P    EE  ++F     AYE LSDP  R +YD+
Sbjct:    3 KETKFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPS---EEAAEKFKEASAAYEILSDPEKRDIYDQ 68          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.733e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  253 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            +Y++LG+  + S  EI+QAYKQ+ +K+HPD +  +R +E  ++F  +QEAYE LSDP  RA+YDR
Sbjct:    6 YYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNR-KEAEEKFKEIQEAYEVLSDPEKRAMYDR 69          
BLAST of CK938098 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 29/70 (41.43%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  238 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 447
            +++  +Y++LG+P + +  EIK+AY+++A++YHPD +P ++  E  ++F  + EAYE LSDP  R LYD+
Sbjct:    2 AQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNK--EAEEKFKEINEAYEVLSDPEKRKLYDQ 69          
The following BLAST results are available for this feature:
BLAST of CK938098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DNJ20_ARATH9.329e-3662.81Chaperone protein dnaJ 20, chloroplastic OS=Arabid... [more]
DNAJ_THESQ1.893e-1246.48Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA1.893e-1246.48Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THEP12.472e-1250.77Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNAJ_THENN4.217e-1249.23Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_THETN2.093e-1146.91Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ2_AQUAE2.093e-1142.53Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
MAS5_YEAST2.733e-1149.28Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNAJ_THEAB2.733e-1149.23Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_ANATD6.089e-1141.43Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_A10 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938098 ID=CK938098; Name=CK938098; organism=Citrus sinensis; type=EST; length=941bp
GGGGGAGTGTGAGAAAGAGAGAGAGAGAGAGAGATGCGTTGCAGCAGCTA
TGGATTGATAATTCCCGGAAGCGAATCCCGCTTCCTGACCACCACCACTA
CCCCAACCACCAACAAAAAACCTGACCGGTTTCCCCGGATTTACCCGACC
AGCGTATCATTCGGGTCGTTGAAAGTGAAGGCGAAATTAAACGACGCCGC
CGGCGGTACGGCTACTGCTACTGCTGTAGTCGACGAATCGAAGGAGCTGA
GCTTCTACGATCTCTTGGGCATACCGGAGTCCGTGAGCTTGGTGGAGATA
AAGCAGGCGTATAAGCAGATGGCCCGCAAGTACCATCCTGACGTATCGCC
GCCGGATCGAGTCGAGGAATACACCCAGCGGTTTATTCGGGTCCAGGAGG
CCTATGAAACGCTGTCGGATCCCGGATTGCGTGCTCTCTACGATCGCGAC
TTGTCCATGGGCCTTCACCTAGCTTTCTCCGCCCGAAGACGCCAGCAAAA
CGACGTGGTATTGTTTATTTATTCGCTTCATTCTTGTTTCTGTTGAATAA
AATTTTCCAAAGATTAGAATTATATTAAACTCAAATGGTTACGGGATTTG
ATTGATTTGGGTTTTCGAGAATTTTTGGATTATTAGGGCATTATCTCTTT
TTACTCTATTTGTAAGTTTGTGTAGGTTTCAAGCTTATCCTAAAAAACGT
TTTTTGTTTTTTGAAAAATTTCCAAAAAAGGTTTAATTGTGGAGAAGAGG
CTACCGACGTTGATGTCCCTATTTGATTGGTTTCAAAGTAAATGACAAAA
ATTAAAGAAAATTCAACTGCTATATCGTTCGTAGATTTTTGCGGAGAGCA
AGGCTTCAGCCTTTAAGCCCTCATATCGACAGGCCAACAAGCATTGGCTT
GATGTGACGTGAGAAGTGAGGCTTGAAAAAGAGTGGTCATG
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