CK938093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938093 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.159e-49 Identity = 100/153 (65.36%), Postives = 119/153 (77.78%), Query Frame = 3 Query: 204 ASSSLFTPSTITVRKHQISPSTISFQGLRPLNTRAKTS-LPKLATSAKRNSFGGIKAELSTPLVIXXXXXXXXXXXRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 659 ++S+L +P+T + +P++ISF GLRPL +S LPKL+T+ +++S ++AELS +VI RFVFFNFQRENVAKQGLPEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 156
BLAST of CK938093 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40 Identity = 90/131 (68.70%), Postives = 99/131 (75.57%), Query Frame = 3 Query: 273 SFQGLRPL--NTRAKTSLPKLATSAKRNSFGGIKAELSTPLVIXXXXXXXXXXXRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 659 SF GLRPL N + S L+ S+ R S +AELS LVI RFVFFNFQREN+AKQ +PEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDP 164
BLAST of CK938093 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34 Identity = 80/135 (59.26%), Postives = 95/135 (70.37%), Query Frame = 3 Query: 255 ISPSTISFQGLRPLNTRAKTSLPKLATSAKRNSFGGIKAELSTPLVIXXXXXXXXXXXRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDP 659 +SP ++ L P + RA S ++ A+R+ +A L +VI RFVFFNFQRENVAKQ +PEQNG THFEAGD RAKE+ +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTSNGYDP 139
BLAST of CK938093 vs. ExPASy Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.960e-18 Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 378 STPLVIXXXXXXXXXXXRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 656 +T +I RFVF FQR V++ GLPEQNGV + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+ Sbjct: 17 NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109 The following BLAST results are available for this feature:
BLAST of CK938093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938093 ID=CK938093; Name=CK938093; organism=Citrus sinensis; type=EST; length=804bpback to top |