CK938089

Overview
NameCK938089
Unique NameCK938089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.047e-86
Identity = 156/194 (80.41%), Postives = 169/194 (87.11%), Query Frame = 1
Query:   70 MLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +LW+++LL T S+IQAKKS +NLKEIT+KVYFDVEI GK AGR+VMGLFGK VPKT ENFRALCTGEKGIGK+GK LHYKGS+FHRIIPSFMLQ            ESIYGEKF DENFKLKHTGPG LSMANAG DTNGSQFFITTVTTSWLDGRHVVFGKV++GMDVVYKVEAEG Q+GTPKSKVVI DSGE
Sbjct:    8 LLWSLLLLGTLSAIQAKKSKENLKEITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGE 201          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 3.919e-81
Identity = 149/194 (76.80%), Postives = 166/194 (85.57%), Query Frame = 1
Query:   70 MLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +L  + L    +SIQAK   ++LKE+T+KVYFDVEI GK AGRVV+GLFGKAVPKTAENFRALCTGEKG+GKSGKPLHYKGS FHRIIPSFM+Q            ESIYG+KF DENFKLKHTGPG+LSMAN+G DTNGSQFFITTVTTSWLDGRHVVFGKV+ GMDVVYK+EAEG+Q+GTPKSKVVIADSGE
Sbjct:    8 LLGTLFLFGAIASIQAK---EDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGE 198          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.146e-64
Identity = 114/166 (68.67%), Postives = 135/166 (81.33%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +V+FD+ IAGKP GR+VM L+   VPKTAENFRALCTGEKG+GKSGKPLH+KGS FHRIIP FM+Q            ESIYGEKFPDENFK KHTGPG+LSMANAGP+TNGSQFF+ TV T+WLDG+HVVFG+V+ G+D+V KVE  G  +GTPKS+ +IAD G+
Sbjct:    5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQ 170          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.333e-64
Identity = 121/191 (63.35%), Postives = 144/191 (75.39%), Query Frame = 1
Query:   82 VVLLATFSSIQAKKSDQNLK-EITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            VVL     ++ A  S+     +ITNKV+FD+EI  KPAGR+V GL+GK VPKT ENFRALCTGEKG+G SGKPLHYK S FHRIIP+FM+Q            ESIYG+KF DENFK+KH+ PGLLSMANAGP+TNGSQFFITTV TSWLDGRH VFG+V+ GMD+V  +E+ G Q+GTP     I++SGE
Sbjct:    6 VVLAIVLVTLWAMPSEAGKDPKITNKVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGE 196          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.712e-60
Identity = 110/167 (65.87%), Postives = 130/167 (77.84%), Query Frame = 1
Query:  151 NKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +KV+FD+ I GK +GR+VM L+   VPKTA NFRALCTGE GIGKSGKPLH+KGS FHRIIP+FM+Q            ESIYGEKFPDENFK KHTGPG+LSMANAGP+TNGSQFF+ TV T WLDG+HVVFG+V+ G+DVV  VE+ G Q+G P    +IAD G+
Sbjct:    4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQ 170          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.227e-58
Identity = 110/166 (66.27%), Postives = 122/166 (73.49%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            KV+FD+ I G PAGRVVM LF    PKTAENFRALCTGEKG+GK GKPLHYKGSTFHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAGP TNGSQFFI T  T WL+G+HVVFG+V+ GMDV+ K EA G  +G     VVIAD G+
Sbjct:    5 KVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQ 170          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.227e-58
Identity = 108/166 (65.06%), Postives = 127/166 (76.51%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            KV+FD+ I GK  GR+VM L+   VPKTAENFRALCTGEKG GKSGK LH+KGS FHRIIP FM+Q            ESI+GEKF DENFK KHTGPG+LSMAN G +TNGSQFF+ TV T+WLDG+HVVFGKV+ GMDVV  +E++G ++G P +  VIAD GE
Sbjct:    5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGE 170          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.662e-58
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +V+FD+ + G PAGR+VM L+   VPKTAENFRALCTGEKG+GKSGKPLHYKGSTFHR+IP FM Q            ESIYGEKFPDE F  K   PG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFG+V+ GMDVV  +E  G +NG+    V +AD G+
Sbjct:    5 RVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQ 170          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.953e-58
Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            KV+FD+ I G PAG++VM L+    PKTAENFRALCTGEKG+G+SGKPLH+KGS+FHR+IP+FM Q            ESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+ G+DVV  +E  G  +G P   VVIAD GE
Sbjct:    6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGE 171          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.947e-57
Identity = 109/166 (65.66%), Postives = 120/166 (72.29%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            KV+FDV I  +PAGRV M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHRIIP FM+Q            ESIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFI TV T WLDG HVVFG+V  GM VV K+E  G ++G P   V IAD GE
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGE 188          
The following BLAST results are available for this feature:
BLAST of CK938089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
CP20A_ARATH4.047e-8680.41Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CP19D_ARATH3.919e-8176.80Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
CYP7_CAEEL1.146e-6468.67Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIB_DICDI3.333e-6463.35Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYP3_CAEEL1.712e-6065.87Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYPH_SOLLC1.227e-5866.27Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYP2_CAEEL1.227e-5865.06Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYPH_MAIZE4.662e-5863.86Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP19B_ARATH7.953e-5863.86Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYP1_CAEEL3.947e-5765.66Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_B07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938089 ID=CK938089; Name=CK938089; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGAC
AAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTT
TCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACA
AACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTGT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGG
AGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTGCAGACAGCGGTGA
ACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACACCTTT
TTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACTCTTAATTTGCCTA
TTTATCATGTAATAGACATTTTAAAATGTCCTAGGTTGTTTGCCAAGTTG
GTGCTTCATTTTAAGGGGATCCTTTTCTCTGATAGCTATCTCATCACATT
TAGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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