CK938047

Overview
NameCK938047
Unique NameCK938047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length134
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:174..307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.685e-18
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    1 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELA AYE
Sbjct:   15 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYE 58          
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.022e-16
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    1 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            EILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAHAYE
Sbjct:   16 EILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYE 59          
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.683e-16
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 1
Query:    1 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            E+LGVSKNA+ +DLKKAYRKAAIKNHPDKGGDPEKFKE+  AYE
Sbjct:   16 EVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYE 59          
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1
Query:    1 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            EILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYE
Sbjct:   17 EILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60          
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.980e-15
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1
Query:    1 EILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            EILGV K A+ +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYE
Sbjct:   17 EILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60          
BLAST of CK938047 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.506e-14
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 1
Query:   19 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAHAYE 132
            KNAS DDLKKAYRKAAIKNHPDKGGDPEKFKELA AY+
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYD 38          
The following BLAST results are available for this feature:
BLAST of CK938047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DNJH_CUCSA3.685e-1897.73DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU2.022e-1688.64DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH2_ALLPO7.683e-1684.09DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH1.712e-1586.36Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH4.980e-1584.09Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO5.506e-1492.11DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004478_G12 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938047 ID=CK938047; Name=CK938047; organism=Citrus sinensis; type=EST; length=134bp
GAGATTCTCGGAGTCTCGAAAAACGCTTCTCAAGATGATCTGAAGAAGGC
TTATAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTG
AGAAGTTTAAAGAGTTGGCACATGCGTATGAGGT
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