CK938043

Overview
NameCK938043
Unique NameCK938043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2076 contig Csv1_Contig2076:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: CARKD_MOUSE (Carbohydrate kinase domain-containing protein OS=Mus musculus GN=Carkd PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.218e-34
Identity = 74/129 (57.36%), Postives = 89/129 (68.99%), Query Frame = 3
Query:  306 DAENV---MREITSVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLL 683
            D EN+   +R I   L   KHKGQ G+I ++GGC+EYTGAPYFA ISALK+GADL+HVFC ++AAPVIKSYSPELIVHP+L+                SS  + EV+KW+ R   LVVGPGLGRD  LL
Sbjct:   45 DMENLFQLVRNIVPALTSKKHKGQDGRIGIVGGCQEYTGAPYFAGISALKVGADLTHVFCAREAAPVIKSYSPELIVHPVLD----------------SSNAVEEVEKWLPRLHALVVGPGLGRDDLLL 157          
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: CARKD_HUMAN (Carbohydrate kinase domain-containing protein OS=Homo sapiens GN=CARKD PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 73/129 (56.59%), Postives = 90/129 (69.77%), Query Frame = 3
Query:  306 DAENVMREITSVLDP---SKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLL 683
            D EN ++ + +++ P   +KHKGQ G+I V+GGC+EYTGAPYFAAISALK+GADLSHVFC   AAPVIK+YSPELIVHP+L+                S   + EV+KW+ R   LVVGPGLGRD  LL
Sbjct:   49 DMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAAISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLD----------------SPNAVHEVEKWLPRLHALVVGPGLGRDDALL 161          
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: CARKD_PONAB (Carbohydrate kinase domain-containing protein OS=Pongo abelii GN=CARKD PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.347e-33
Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 3
Query:  306 DAENVMREITSVLDP---SKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLL 683
            D EN ++ + +++ P   +KHKGQ G+I V+GGC+EYTGAPYFAAISALK+GADLSHVFC   AAPVIK+YSPELIVHP+L+                S   + E +KW+ R   LVVGPGLGRD  LL
Sbjct:   31 DMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAAISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLD----------------SRSAVHEAEKWLPRLHALVVGPGLGRDDALL 143          
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: YCB3_SCHPO (Uncharacterized protein C61.03 OS=Schizosaccharomyces pombe GN=SPCC61.03 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.350e-25
Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 3
Query:  318 VMREITSVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYL 680
            V R I  +LD + HKGQAG++ V GGC+ YTGAPY++++S++  G+D SH+FC K+AA VIKSYSP+LIVHP L E  + +G ED   +C        +   M R   +V+GPGLGRD ++
Sbjct:   15 VKRIIPPLLD-TFHKGQAGRVGVFGGCQHYTGAPYYSSMSSMLFGSDQSHIFCEKEAANVIKSYSPDLIVHPFLREK-DKAGPEDSVDKCFEL-----IKPMMGRLHAIVIGPGLGRDEWM 128          
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: YKP1_YEAST (Uncharacterized protein YKL151C OS=Saccharomyces cerevisiae GN=YKL151C PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  348 PSKHKGQAG-KIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLL 683
            P  HKGQ+G ++ +IGGC +YTGAPYF+A +   +G DL+HV C  +A  VIKSY+P L+VHP L  S     ++ +E+R        +++  ++R   +V+GPGLGRDP +L
Sbjct:   24 PKFHKGQSGGRVCIIGGCEDYTGAPYFSANATALMGCDLTHVICEYNAGTVIKSYTPNLMVHPYLRMSNTKLDVDMDEQR-------KKINSLLDRIHVVVIGPGLGRDPLML 129          
BLAST of CK938043 vs. ExPASy Swiss-Prot
Match: YNH2_CAEEL (Uncharacterized protein R107.2 OS=Caenorhabditis elegans GN=R107.2 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21
Identity = 55/111 (49.55%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  342 LDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDP 674
            L P   KG  GK+ VIGG  EYTGAPYFAA SA ++GADL H+FC  DAA VIK YSP+LIVHP +  +  I  L                     R D +V+GPGLGR+P
Sbjct:   11 LTPHLRKGDCGKMGVIGGSLEYTGAPYFAASSASRLGADLIHIFCDPDAAQVIKGYSPDLIVHPGMTANSIIPKL--------------------SRMDAIVIGPGLGRNP 101          
The following BLAST results are available for this feature:
BLAST of CK938043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CARKD_MOUSE1.218e-3457.36Carbohydrate kinase domain-containing protein OS=M... [more]
CARKD_HUMAN4.629e-3456.59Carbohydrate kinase domain-containing protein OS=H... [more]
CARKD_PONAB1.347e-3355.81Carbohydrate kinase domain-containing protein OS=P... [more]
YCB3_SCHPO1.350e-2548.76Uncharacterized protein C61.03 OS=Schizosaccharomy... [more]
YKP1_YEAST1.183e-2144.25Uncharacterized protein YKL151C OS=Saccharomyces c... [more]
YNH2_CAEEL3.441e-2149.55Uncharacterized protein R107.2 OS=Caenorhabditis e... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004478_G07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938043 ID=CK938043; Name=CK938043; organism=Citrus sinensis; type=EST; length=747bp
GGGGGCTCGCGTTGGTTAATTGTTAACACTTCCTCCAGCTGCCCCCTAAA
GACGATCAGAGAATTTAGCCTTCTTTTGTTTAACAGGCTCATTTGAACAG
AAAGTAGTACTTGCCCATGTTAATTAGATATGGCGTGAGTACCGGGTTCA
CATCACTGGGTTCTGTGAAAAATTGTATGCTGGCTTCTTCGGCTGTTTTT
AGAAGGCAACAGTTTTTGATAAGGTCGCTTGGAGGCTATAGTGATCACAT
TGATTCGAGAAGAATGCAAGATATAAGATCAATGAGTGGAACTACATTTG
AGGCTGATGCTGAGAATGTTATGAGAGAAATTACTTCTGTCCTCGACCCT
AGTAAACATAAGGGCCAGGCTGGGAAGATAGCTGTGATTGGCGGGTGTCG
TGAGTACACTGGTGCACCATATTTCGCTGCTATTTCGGCTTTGAAAATTG
GTGCAGATTTATCTCATGTGTTCTGTACAAAAGATGCTGCTCCCGTTATC
AAAAGCTACAGTCCGGAATTAATAGTTCACCCAATTCTGGAAGAATCTTA
TAACATTAGTGGTTTGGAGGATGAGGAGAGAAGATGCATCTCAAGCAAGA
TTCTTGCTGAGGTTGATAAATGGATGGAAAGATTTGATTGTCTTGTTGTT
GGTCCAGGCCTTGGAAGGGATCCATATCTGCTGGTTTGTTGTTCTTGACC
GATCCTTTCTAATTGTAATTTGTGTCTGAATATTGACTTAGGCTATG
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