CX675419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_DANRE (OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.631e-26 Identity = 64/150 (42.67%), Postives = 84/150 (56.00%), Query Frame = -3 Query: 123 VNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSVIPI 572 + +I DGHC+YRAVE QL ++LR A YMR H+ DF+PF + N +A E FE YC +V TAAWGG+LEL+AL+ L+ I + P + +G+EY I L Y RHA+GLGEHYNSV P+ Sbjct: 149 IKEISSDGHCMYRAVEHQLTERG---LALGLKELRDQTAQYMRSHADDFMPFLTNPNTGDMYTA----EEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQADSPCITIGEEY-------DKPKITLIYMRHAYGLGEHYNSVEPL 284
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_CHICK (OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.354e-26 Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = -3 Query: 132 NIVSDRTVEDXXXXXXXXXXXLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 641 N+ R +E L + I DGHC+YRA+EDQL + + LR A Y+ H DFLPF + N G+ ++ E FE YC ++ +TAAWGG+LELRAL+H L+ I + P + +G+EY IIL Y RHA+GLGEHYNSV Sbjct: 135 NLTGARHLESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQL---KDHHNSWTVATLRNQTAKYIHSHFDDFLPFLTNPNT-GDMYSK---EEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVVQMDSPSIIVGEEY-------SGKPIILVYMRHAYGLGEHYNSV 290
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_HUMAN (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25 Identity = 66/170 (38.82%), Postives = 88/170 (51.76%), Query Frame = -3 Query: 132 NIVSDRTVEDXXXXXXXXXXXLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 641 N+ R +E L + I DGHC+Y+A+EDQL + LR A YM+ H DFLPF + N E F+ YC+++ +TAAWGG+LELRAL+H L+ I I P + +G+EY +IL Y RHA+GLGEHYNSV Sbjct: 126 NLTGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVV---ALRSQTAEYMQSHVEDFLPFLTNPNT----GDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEY-------SKKPLILVYMRHAYGLGEHYNSV 281
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_XENTR (OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.035e-24 Identity = 66/171 (38.60%), Postives = 91/171 (53.22%), Query Frame = -3 Query: 132 SNIVSDRTVEDXXXXXXXXXXXLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 644 +N+ R +E L + I DGHC+YRA+E QL + N LR A YM++H+ DFLPF L+ + G+ Q E F YC ++ +T AWGG+LELRAL+H L+ I + + +G+EY +I L Y RHA+GLGEHYNSV Sbjct: 128 ANLSGARHLESQKLARILAERELQIRQIPSDGHCMYRAIEHQLRERGNDLTVAN---LRSQTADYMQNHAEDFLPF-LTNSSTGDMYTQ---EEFLKYCTDIVNTPAWGGQLELRALSHILKTAIEVIQAESSPIVIGEEY-------SSKAITLVYMRHAYGLGEHYNSV 284
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_MOUSE (OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.035e-24 Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = -3 Query: 132 VNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 572 + I DGHC+Y A+EDQL + LR+ A YM+ HS DFLPF L+ G+ E F YC ++ +TAAWGG+LELRAL+H L+ I I P + +G+EY ++L Y RHA+GLGEHYNSV Sbjct: 150 IKQIPSDGHCMYGALEDQLREQDCALT---VASLRRQTAEYMQTHSDDFLPF-LTNPSTGDMYTP---EEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQADAPPIIVGEEY-------PRNPLVLVYMRHAYGLGEHYNSV 282
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6B_XENLA (OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.616e-23 Identity = 65/171 (38.01%), Postives = 89/171 (52.05%), Query Frame = -3 Query: 132 SNIVSDRTVEDXXXXXXXXXXXLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 644 +N+ R +E L + I DGHC+YRA+E QL + N LR A YM+ + DFLPF L+ + G+ Q E F+ YC ++ +T AWGG+LELRAL+H L+ I + + +G+EY I L Y RHA+GLGEHYNSV Sbjct: 128 ANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEHQLNEQGNSLTVAN---LRSQTADYMQKRAEDFLPF-LTNSSTGDMYTQ---EEFQKYCTDIVNTPAWGGQLELRALSHILKTPIEVIQAESLPIVIGEEY-------SNKPITLVYMRHAYGLGEHYNSV 284
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6A_HUMAN (OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22 Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = -3 Query: 123 IKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSVIPI 563 I DGHC+YRA++DQL + + LR A+YM+ H +FLPF+ + E S + F YC + T AWGG+LELRAL+H L+ I + P + +G+EY IIL Y R+A+ LGEHYNSV P+ Sbjct: 146 IPADGHCMYRAIQDQLVF------SVSVEMLRCRTASYMKKHVDEFLPFFSNP----ETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEY-------VKKPIILVYLRYAYSLGEHYNSVTPL 275
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU6A_MOUSE (OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20 Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = -3 Query: 123 IKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSVIPI 563 I DGHC+YRA++DQL + LR A YMR H DFLPF+ +E G + E F YC ++ A+WGG+LELRAL+H L+ I + + P + +G+EY + L Y +A GEHYNSV PI Sbjct: 147 IPADGHCMYRAIQDQLVF------SVTIESLRYRTAYYMRKHIDDFLPFF-TEPEAGNFYTR---EDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQANSPTIVIGEEY-------TRKPVTLVYLHYACDFGEHYNSVKPI 276
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: OTU2_YEAST (OTU domain-containing protein 2 OS=Saccharomyces cerevisiae GN=OTU2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15 Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = -3 Query: 132 DIKPDGHCLYRAVEDQLAHLSGGAS---PYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSV 566 DI+PDGHCL+ ++ DQL + +LR + Y+++H DF+P+ E + +++ + Y KE+E TA WGGE+E+ AL+H I I + G+ + L Y++H++ LGEHYNS+ Sbjct: 171 DIQPDGHCLFASILDQLKLRHDPKKLDQDMDVMKLRWLSCNYVQEHRDDFIPYLFDEETM-------KMKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISI-------LMSGRPIQVYNECGKNPELKLVYYKHSYALGEHYNSL 304
BLAST of CX675419 vs. ExPASy Swiss-Prot
Match: YLO3_SCHPO (OTU domain-containing protein C1952.03 OS=Schizosaccharomyces pombe GN=SPAC1952.03 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.044e-12 Identity = 41/146 (28.08%), Postives = 69/146 (47.26%), Query Frame = -3 Query: 129 DIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYXXXXXXXXXXSIILSYHRHAFGLGEHYNSVI 566 DI DG+CL+ ++ QL + N Q LR A Y+ H F F L E +V +YC E+ + + WG ++E++AL + L + +Y+ P ++ + ++Y++H FGLG HYNS++ Sbjct: 189 DIPADGNCLFASISHQLNYHHN--VKLNSQALRNKSADYVLKHCEQFEGFLLDEE-------SGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVLKFNPS-----TVKFEKPLCIAYYQHLFGLGAHYNSLL 320 The following BLAST results are available for this feature:
BLAST of CX675419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675419 ID=CX675419; Name=CX675419; organism=Citrus sinensis; type=EST; length=844bpback to top |