CX675417

Overview
NameCX675417
Unique NameCX675417
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675417_ssr84 microsatellite CX675417_ssr84:84..93. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.685e-73
Identity = 130/243 (53.50%), Postives = 177/243 (72.84%), Query Frame = -1
Query:  129 HVHDQTGQKPHYVGHSLGTLIALASFSKDQLVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVDCTNLLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 857
            H+H  TGQK HY+GHSLGTLI  ASFS+  LV+++RSAA+LSP+AY+  MT+ +   AA  FLAEA   LG  EF+P+   V   +K IC K G+DC +L++  TG+NCCL +S +D+FL +EPQ+TSTKNMIH+AQ +R+  +  Y+Y + + N KHYGQ  PP YN+++IPH+LPLF SYGG D+L+DV DV+ LL+  K H+ DK+ VQ+ +DYAHAD++MG  A  V+Y  +  FFK Q
Sbjct:  175 HIHGLTGQKIHYLGHSLGTLIGFASFSEKGLVDQVRSAAMLSPVAYLSHMTTVIGDIAAKTFLAEATSILGWPEFNPKSGLVGDFIKAICLKAGIDCYDLVSVITGKNCCLNASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNIKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFFKRQ 417          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 88/247 (35.63%), Postives = 151/247 (61.13%), Query Frame = -1
Query:  123 LQHVHDQTGQKPHYVGHSLGTLIALASFSKDQLVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVDCTNLLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ*K 863
            +Q+++  +  K   VGHS GT+++ A+ ++  +   + +AALL PI+Y+  +T+PL +      L + +  LGL + + R + +VKL+ ++C+   +DCT+ L S TG NCC  +S ++ +L++EP  +S KN+ H+ QMIR+GT A YDY    +N + YG   PP + ++ IP  LP+++ YGG D L+DV DV+  L  L         + Y +DY H D+V+G +A + +Y+ ++ FF+ + K
Sbjct:  149 IQYLYSISNSKIFLVGHSQGTIMSFAALTQPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLCEGH-MDCTDFLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDY-GYFKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAELPSSP----ELLYLEDYGHIDFVLGSSAKEDVYKHMIQFFRAKVK 389          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.871e-26
Identity = 80/247 (32.39%), Postives = 130/247 (52.63%), Query Frame = -1
Query:  147 LQHVHDQTGQKP-HYVGHSLGTLIALASFSKD-QLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG---QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 863
            +  + ++TGQK  +YVGHS GT IA  +FS + +L  K++    L+P+  V    SP+ K       + + L+  G   F P       +   +C +      C+N L + +G   QN  L  S +DV+L H P  TS +NM+H AQ +  G +  +D+ N ++N  H+ Q  PPLYN+T +  ++P  +  GG D ++D  DV+ LL  + +    KL+  Y     H D+ +GE+A Q +Y+ L+
Sbjct:  154 INFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLF--GDKMFHPHTLFDQFIATKVCNRKLFRRICSNFLFTLSGFDPQN--LNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDWGNSDQNMMHFHQLTPPLYNITKM--EVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIPHYN----HVDFYLGEDAPQEIYQDLI 390          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPG_CANFA (Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.562e-23
Identity = 77/242 (31.82%), Postives = 127/242 (52.48%), Query Frame = -1
Query:  144 QTGQ-KPHYVGHSLGTLIALASFSKD-QLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTGQNCC-LKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQ--DYAHADYVMGENAGQVLYEPLMA 845
            +TGQ K HYVGHS GT I   +FS + +L  ++++   L+P+A V    + L K     +FL + ++  G   F P       L   +C +  VD  C+N L    G +   L  S +DV+L H P  TS +N++H +Q ++ G    +D+ +  +N  HY Q  PP YN+T +   +P+ +  GG D L+D +DV LLL  L +      ++ +R+   Y H D++   +A Q +Y  +++
Sbjct:  160 KTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLLNKLMLVPSFLFKLIF--GNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVDLLLSKLPN------LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS 391          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPG_MOUSE (Gastric triacylglycerol lipase OS=Mus musculus GN=Lipf PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.652e-23
Identity = 77/245 (31.43%), Postives = 124/245 (50.61%), Query Frame = -1
Query:  147 LQHVHDQTGQ-KPHYVGHSLGTLIALASFSKDQ-LVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG-QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 863
            +  +  +TGQ K HYVGHS GT I   +FS +  L  K++    L+P+A V    SP  K +    FL + ++  G   F P       L   +C +  +D  C+N L  F G     L  S  DV+L H P  TST+++ H AQ+ + G +  Y++ +  +N  HY Q  PP Y+++++   +P+ +  GG D L+D  DV +LL  L +    K ++ Y     H D++   +A Q +Y  ++
Sbjct:  153 IDFIVQKTGQEKIHYVGHSQGTTIGFIAFSTNPALAKKIKRFYALAPVATVKYTESPFKKISLIPKFLLKVIF--GNKMFMPHNYLDQFLGTEVCSRELLDLLCSNALFIFCGFDKKNLNVSRFDVYLGHNPAGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVSAM--TVPIAVWNGGHDILADPQDVAMLLPKLPNLLYHKEILPYN----HLDFIWAMDAPQEVYNEIV 389          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPG_RAT (Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.935e-23
Identity = 77/246 (31.30%), Postives = 126/246 (51.22%), Query Frame = -1
Query:  144 LQHVHDQTGQ-KPHYVGHSLGTLIALASFSKDQ-LVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG-QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 863
            +  +  +TGQ K HYVGHS GT I   +FS +  L  K+++   L+P+A V    SPL K +    FL + ++  G   F P       L   +C +  +D  C+N L  F G     L  S  DV+L H P  TS ++ +H AQ++R G    +++ +  +N  HY Q  PP Y+++++   +P+ +  GG D L+D  DV +LL  L +    K ++ Y     H D++   +A Q +Y  +++
Sbjct:  153 INFIVQKTGQEKIHYVGHSQGTTIGFIAFSTNPTLAKKIKTFYALAPVATVKYTQSPLKKISFIPTFLFKLMF--GKKMFLPHTYFDDFLGTEVCSREVLDLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPAGTSVQDFLHWAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLLPKLSNLLFHKEILAYN----HLDFIWAMDAPQEVYNEMIS 390          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.354e-22
Identity = 76/243 (31.28%), Postives = 125/243 (51.44%), Query Frame = -1
Query:  147 DQTGQKP-HYVGHSLGTLIALASFSKD-QLVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG---QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQ--DYAHADYVMGENAGQVLYEPLM 848
            +++GQK   YVGHS GT IA  +FS + +L  K+R    L+P+A V    SP+ K    +  A  + + G   F         +   +C +      C+N L S +G   QN  L  S +DV+L   P  TS +NM+H AQ +  G +  +D+ N ++N  H+ Q  PP+YN++ +   +P  +  GG D ++D  D K LL  + +      ++ Y++   Y H D+ +G++A Q +Y  L+
Sbjct:  158 EKSGQKQLFYVGHSQGTTIAFIAFSTNPELAKKIRLFFALAPVATVKYTRSPMKKLTTLSRKAVKVLF-GDKMFSTHTWFEQFIATKVCNRKLFHQLCSNFLFSLSGFDPQN--LNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKM--RVPTAMWSGGQDVVADAKDTKNLLPKIAN------LIYYKEIPHYNHMDFYLGQDAPQEVYGDLI 389          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPG_HUMAN (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.354e-22
Identity = 76/241 (31.54%), Postives = 123/241 (51.04%), Query Frame = -1
Query:  144 QTGQKP-HYVGHSLGTLIALASFSKD-QLVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWL--GLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG-QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 845
            +TGQK  HYVGHS GT I   +FS +  L  ++++   L+P+A V    S + K     F+ ++L+    G   F P       L   +C +  ++  C+N L    G  +    +S +DV+L H P  TS +NM H  Q ++ G    YD+ +  +N+ HY Q  PP YN+T++  ++P+ +  GG D L+D  DV LLL  L +    K +  Y     H D++   +A Q +Y  +++
Sbjct:  160 KTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSLINKL---RFVPQSLFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAM--NVPIAVWNGGKDLLADPQDVGLLLPKLPNLIYHKEIPFYN----HLDFIWAMDAPQEVYNDIVS 391          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPG_BOVIN (Gastric triacylglycerol lipase OS=Bos taurus GN=LIPF PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21
Identity = 76/240 (31.67%), Postives = 119/240 (49.58%), Query Frame = -1
Query:  144 QTGQKP-HYVGHSLGTLIALASFSKDQ-LVNKLRSAALLSPIAYVGQMTSPLAKNAA-DNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTG-QNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 845
            +TGQK  HYVGHS GT I   +FS    L  K++    L+P+A V    S   K A   +FL + ++  G   F P       L   +C +  +D  C N L + TG  N     S +DV++ H P  TS +N +H  Q ++ G    +D+    +N  HY QP PP+YN+T++  ++P+ +     D L+D  DV  LL  L +    K +     +Y H D++   +A Q +Y  +++
Sbjct:  159 RTGQKKLHYVGHSQGTTIGFIAFSTSPTLAEKIKVFYALAPVATVKYTKSLFNKLALIPHFLFKIIF--GDKMFYPHTFLEQFLGVEMCSRETLDVLCKNALFAITGVDNKNFNMSRLDVYIAHNPAGTSVQNTLHWRQAVKSGKFQAFDWGAPYQNLMHYHQPTPPIYNLTAM--NVPIAVWSADNDLLADPQDVDFLLSKLSNLIYHKEI----PNYNHLDFIWAMDAPQEVYNEIVS 390          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LICH_RAT (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus GN=Lipa PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = -1
Query:  135 LQHVHDQTGQKPHY-VGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTGQN-CCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 863
            + ++ ++TGQ+  Y VGHS G  I   +FS+  +L  K++    L+P+  +   + P+ K     + L E L+  G  +F P+   V  L  +IC    +   C N+     G N   L  S VDV+  H P  TS +NM+H  Q+++   +  +D+ + ++N  HY Q  PPLY++  +   LP  L  GG D L+D +D+ +LL  +      K +     ++ H D++ G +A   LY  +++  K
Sbjct:  154 INYILNKTGQEQLYNVGHSQGCTIGFIAFSQMPELAKKVKMFFALAPVLSLNFASGPMVKLGRLPDLLLEDLF--GQKQFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTHCPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDM--QLPTALWSGGKDWLADTSDINILLTEIPTLVYHKNI----PEWDHLDFIWGLDAPWRLYNEVVSLMK 394          
The following BLAST results are available for this feature:
BLAST of CX675417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
LIP2_ARATH1.685e-7353.50Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIP1_ARATH1.178e-4235.63Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIPK_HUMAN5.871e-2632.39Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPG_CANFA3.562e-2331.82Gastric triacylglycerol lipase OS=Canis familiaris... [more]
LIPG_MOUSE4.652e-2331.43Gastric triacylglycerol lipase OS=Mus musculus GN=... [more]
LIPG_RAT7.935e-2331.30Gastric triacylglycerol lipase OS=Rattus norvegicu... [more]
LIPK_MOUSE1.354e-2231.28Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LIPG_HUMAN1.354e-2231.54Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
LIPG_BOVIN1.146e-2131.67Gastric triacylglycerol lipase OS=Bos taurus GN=LI... [more]
LICH_RAT2.161e-2029.32Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62B03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B03-D6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675417 ID=CX675417; Name=CX675417; organism=Citrus sinensis; type=EST; length=863bp
TTTTTTTTTTTGTATTAACATAAAAGTCATTTAATAAAAAAAGGGTACAT
CTTTAGAGAACCAACACAAATGATTCGAGCAGACTCTCTCTCTTTTTCTT
TCTGTGAGTTGTCTCATTTACATTTTCATTGTAACTTAAAGAAAGCCATG
AGAGGCTCATACAGAACTTGCCCAGCATTTTCACCCATAACATAGTCTGC
ATGAGCATAATCCTGTCTGTACTGAACTACAAGCTTATCTCCCTCATGAT
CTTTGAGGCTCTCCAGCAGCAGTTTCACATCATTGACATCCGAAAGAGCG
TCGGCTCCTCCGTAACTGAGAAAGAGAGGAAGATCATGCGGAATGCTTGT
CATGTTGTATAGAGGCGGATTCGGCTGCCCATAGTGTTTCTTGTTCTCTT
CTTCATTGTTGTAATCGTACATTGCAATGGTTCCTTCTCTAATCATCTGA
GCTACGTGGATCATGTTCTTAGTTGAAGTTGCCTGAGGCTCGTGTTCTAG
AAATACATCTACTATCGAAGACTTTAGGCAGCAGTTTTGGCCTGTGAAAG
AGTTCAATAAGTTGGTACAATCAACTCCAGGTTTTTTGCAAATGTTTTTA
AGAAGTTTGACTACAGCCTCCCCTCTTGGATCAAATTCATCAAGGCCTAA
CCAGTATAATGCCTCGGCTAGAAAGTTATCGGCAGCATTTTTGGCAAGTG
GTGAGGTCATTTGTCCAACATAGGCAATTGGACTAAGCAAGGCAGCTGAC
CTTAACTTGTTCACCAGCTGATCCTTAGAAAATGAAGCGAGAGCAATCAG
AGTTCCCAGTGAATGCCCAACATAGTGTGGTTTCTGTCCCGTTTGATCAT
GCACATGTTGTAA
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