CX675415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.832e-31 Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = -3 Query: 469 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPL-PLASNAEN 762 L+AELD+LFEF+GELMA KK+WLIVYTD+E DMMLVGDDPWQEFC MVRKIFIYTKEEV KMN +LS + E+ + GEG DAK+ K P S+A N Sbjct: 760 LVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAKSASNPSLSSAGN 858
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = -3 Query: 469 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPLPLASNAEN 762 L AELD++FEFDGEL++ KNW IVYTD+EGDMMLVGDDPW+EFC +VRKI+IYTKEEV KMNS S + + +DS N +G LP+ + ++N Sbjct: 719 LKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDDSSENEKG--------HLPMPNKSDN 808
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.712e-26 Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = -3 Query: 541 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDS 762 LIAELDQ+F+F+GEL + KNW++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV KMN +L+S+ EDS Sbjct: 740 LIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSEDS 813
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25 Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = -3 Query: 469 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNG--EGIDAKEVKQPLPLAS-NAEN 762 LIAELD +F+F+GEL KK W++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV +MN +L+S+ EDS N G +E++ L +S N+EN Sbjct: 752 LIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSEN 852
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25 Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = -3 Query: 469 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNG--EGIDAKEVKQPLPLAS-NAEN 762 LIAELD +F+F+GEL KK W++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV +MN +L+S+ EDS N G +E++ L +S N+EN Sbjct: 752 LIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSEN 852
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = -3 Query: 574 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMN 762 L +L+++F+ GEL+ K W +VYTDDE DMM+VGDDPW EFCGMVRKIFIYT EEV K++ Sbjct: 569 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.720e-18 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 517 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS-VSLSSKGEDSPMNGEGID 762 LI EL+++FE G+L+A K W++V+TDDEGDMML GDDPW EFC M +KIFIY+ +EV KM + + +SS E+ E + Sbjct: 516 LIDELEEMFEIQGQLLARDK-WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLENEEYGNESFE 597
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.411e-17 Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 562 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSL 762 LI EL+++FE +GEL + K W IV+TDDEGD MLVGDDPW EFC M +K+FIY +EV KM S SL Sbjct: 538 LIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL 603
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.197e-16 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 469 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPLPLASNAEN 762 LI ++++LF+ GEL + + W IV+TDDEGDMMLVGDDPW EFC MV++IFI++KEEV KM +P N + +EV+ L S +N Sbjct: 550 LIDDIEKLFDIKGELRS-RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM-----------TPGNQLRMLLREVETTLTTTSKTDN 635
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.482e-16 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 499 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQ 762 L +L+++F+ GEL A K W +VYTDDE DMMLVGDDPW EFC MV++I+IYT EE ++ S P+ G+ I KQ Sbjct: 575 LRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKS------KLPIIGDAIKPNPNKQ 656 The following BLAST results are available for this feature:
BLAST of CX675415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675415 ID=CX675415; Name=CX675415; organism=Citrus sinensis; type=EST; length=764bpback to top |