CX675414

Overview
NameCX675414
Unique NameCX675414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675414 vs. ExPASy Swiss-Prot
Match: AEDO_MOUSE (2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 59/192 (30.73%), Postives = 90/192 (46.88%), Query Frame = 2 
Query:  128 LQRLFLSCKDVFRGPGTV---PAPS---HVQMLCSILDEMKPEDVGLSSKLQLLSAKDAMKGTPIVTSTTIYKCQNFSLCLFFLPPTAVIPLHNHPGMTVFSKLLLGTMHIKSYDWVD-------PVDANDSAAPTKP------RLAKLIADSDFTAPCNTSVLYPTTGGNIHEFTAIT-TCAVLDVLGPPY 643
            +QR+       FRG  T    PAP    ++ +L S+L +++ ED+ ++ +  L   +   +  P VT   IY+ + FSL +F L     IPLH+HPGM    K+L GT+ I   D +D       P        P +P      R   L + +++T      VL P    N+H+  A+    A LD+L PPY
Sbjct:   10 IQRIARQACLTFRGSSTGSEGPAPGFPENLSLLKSLLTQVRAEDLNIAPRKAL--PQPLPRNLPPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLDTGAGHRRPPPEQQFEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAAFLDILAPPY 198
The following BLAST results are available for this feature:
BLAST of CX675414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AEDO_MOUSE2.241e-1230.732-aminoethanethiol dioxygenase OS=Mus musculus GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_62B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B01-D2-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675414 ID=CX675414; Name=CX675414; organism=Citrus sinensis; type=EST; length=644bp
AGCGGTCAGCAAGGTTGGATATGCGCATAGTAAGGTTGCTATGAAGAAGA
AGAGCGGTTATCGAGGTCGATGCAGGAGAAGAAATCACGACAGATATGCA
CCCGATAATAAAACGGTGCCGATGGCGCTGCAGCGTCTGTTTCTTTCTTG
CAAAGACGTCTTCAGAGGCCCTGGAACCGTTCCCGCTCCTTCTCATGTCC
AAATGTTGTGCTCTATTCTTGATGAAATGAAGCCAGAGGATGTTGGGCTT
AGCAGTAAGTTACAGTTACTTAGTGCCAAAGATGCAATGAAAGGGACGCC
AATTGTCACATCCACTACAATATACAAATGCCAGAACTTTTCGTTGTGTC
TTTTCTTTCTTCCTCCAACTGCTGTGATCCCCTTGCACAACCATCCGGGA
ATGACTGTTTTTAGCAAGCTTTTGCTCGGGACAATGCACATAAAATCGTA
CGATTGGGTCGATCCTGTTGACGCAAACGATTCTGCAGCCCCCACAAAAC
CGCGATTGGCGAAGTTGATAGCCGACAGTGATTTCACAGCACCTTGCAAC
ACTTCTGTGCTATATCCAACAACAGGAGGCAATATCCATGAATTCACAGC
CATTACGACATGTGCCGTGCTCGATGTGCTTGGACCTCCCTACT
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