CX675413

Overview
NameCX675413
Unique NameCX675413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675413 vs. ExPASy Swiss-Prot
Match: AEDO_MOUSE (2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 60/195 (30.77%), Postives = 88/195 (45.13%), Query Frame = -1
Query:  182 PIVTSTTIYKCQNSSLCLFFLPPTAVIPLHNHPGMTVFSKLLLGTMHIKSYDWVD-------PVDANDSAAPTKP------RLAKLIADSDFTAPCNTSVLYPTTGGNIHEFTAIT-TCAVLDVLGPPYSKDDGRDCSYYKELPLPAVPNGENQEAKEDDGGESCRWLEEIGVPENSHMDEI-----EYLGPQII 709
            P VT   IY+ +  SL +F L     IPLH+HPGM    K+L GT+ I   D +D       P        P +P      R   L + +++T      VL P    N+H+  A+    A LD+L PPY  +DGRDC YY+ +  P  P        ++  G +C    E+ + E    D+       Y GP+++
Sbjct:   71 PPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLDTGAGHRRPPPEQQFEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAAFLDILAPPYDPEDGRDCHYYRVVE-PIRP--------KEASGSACDLPREVWLLETPQADDFWCEGEPYPGPKVL 255          
BLAST of CX675413 vs. ExPASy Swiss-Prot
Match: AEDO_HUMAN (2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 59/196 (30.10%), Postives = 86/196 (43.88%), Query Frame = -1
Query:  185 PIVTSTTIYKCQNSSLCLFFLPPTAVIPLHNHPGMTVFSKLLLGTMHIKSYDWVDPVDANDSAA---------PTKPRLAKLI------ADSDFTAPCNTSVLYPTTGGNIHEFTAIT-TCAVLDVLGPPYSKDDGRDCSYYKELPLPAVPNGENQEAKEDDGGESCRWLEEIGVPENSHMDEI-----EYLGPQI 709
            P VT   IY+    SL +F L     IPLH+HPGM    K+L GT+ I   D +D        A         P +PR  + +      + +++T      +L P    N+H+  A+    A LD+L PPY  DDGRDC YY+ L  P  P        ++    +C    E+ + E    D+       Y GP++
Sbjct:   83 PPVTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLDAGGGQRPRALPPEQQFEPPLQPREREAVRPGVLRSRAEYTEASGPCILTPHR-DNLHQIDAVEGPAAFLDILAPPYDPDDGRDCHYYRVLE-PVRP--------KEASSSACDLPREVWLLETPQADDFWCEGEPYPGPKV 268          
BLAST of CX675413 vs. ExPASy Swiss-Prot
Match: AEDO_DICDI (Probable 2-aminoethanethiol dioxygenase OS=Dictyostelium discoideum GN=ado-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 39/114 (34.21%), Postives = 56/114 (49.12%), Query Frame = -1
Query:  329 SLCLFFLPPTAVIPLHNHPGMTVFSKLLLGTMHIKSYDWVDPVDANDSAAPTKPRLAKLIADSDFTAPCNTSVLYPTTGGNIHEF-TAITTCAVLDVLGPPYSKDDGRDCSYYK 667
            +L +F  PP   IP H+HP MTV SK+L G++   S+DW+D                 ++  +D        +  P    NIH F +    CAVLD+L PPY  +  R C+YY+
Sbjct:   70 TLAIFAFPPNTCIPTHDHPQMTVLSKVLYGSISCDSFDWIDNTSNVKKQGKAIYTGTNILNSNDE----KVKITLPNE-NNIHRFQSGDEHCAVLDLLYPPYDSNFYRSCTYYR 178          
The following BLAST results are available for this feature:
BLAST of CX675413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AEDO_MOUSE2.202e-1430.772-aminoethanethiol dioxygenase OS=Mus musculus GN=... [more]
AEDO_HUMAN1.427e-1330.102-aminoethanethiol dioxygenase OS=Homo sapiens GN=... [more]
AEDO_DICDI1.744e-1134.21Probable 2-aminoethanethiol dioxygenase OS=Dictyos... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_62B01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B01-D2-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675413 ID=CX675413; Name=CX675413; organism=Citrus sinensis; type=EST; length=709bp
TTTTGAAAAAGAAATGAAATTTTGCTATTAACATAGTGAAAACTCAGGTC
AGGAAACAACGTAATATATGTGTATATATAAATACAAAACCATTGACTAG
CTATGAAACAAAAGAAGATAATGCGTTGAAATTTTTTTTTATCACGCGAC
TGTGGGCTGAAGCTAGTTACAGCTACTACTCAATTATCTGCGGTCCCAAG
TACTCAATTTCATCCATGTGTGAGTTCTCTGGCACCCCAATCTCTTCCAA
CCACCTACAACTCTCACCACCATCATCCTCTTTTGCCTCCTGATTCTCTC
CATTTGGAACCGCGGGAAGTGGCAACTCCTTGTAATATGAGCAGTCCCGA
CCATCGTCCTTAGAGTAGGGAGGTCCAAGCACATCGAGCACGGCACATGT
CGTAATGGCTGTGAATTCATGGATATTGCCTCCTGTTGTTGGATATAGCA
CAGAAGTGTTGCAAGGTGCTGTGAAATCACTGTCGGCTATCAACTTCGCC
AATCGCGGTTTTGTGGGGGCTGCAGAATCGTTTGCGTCAACAGGATCGAC
CCAATCGTACGATTTTATGTGCATTGTCCCGAGCAAAAGCTTGCTAAAAA
CAGTCATTCCCGGATGGTTGTGCAAGGGGATCACAGCAGTTGGAGGAAGA
AAGAAAAGACACAACGAAGAGTTCTGGCATTTGTATATTGTAGTGGATGT
GACAATTGG
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