CX675404

Overview
NameCX675404
Unique NameCX675404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_MEDTR (1-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.258e-93
Identity = 162/219 (73.97%), Postives = 185/219 (84.47%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD++P+L+V T QG  KLH F  D+WTI+FSHPGDFTPVCTTELGKMA Y  EF+KR V LLG+SCDD++SH EWIKDIEA+TPG KV+YPII+DP REIIKQLNMVDPDEKDS+G  LPSRALHIVGPD ++KLSFLYPA TGRNMDEV+R ++SLQKA K+K+ATPANWK G+          DQAKE FPQGF+T DLPSKKEYLRFTNV
Sbjct:    1 MPGLTIGDTIPDLEVDTTQGKIKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEFNKRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDSNG-NLPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKYKIATPANWKPGEPVVISPDVTNDQAKEMFPQGFKTADLPSKKEYLRFTNV 218          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSJ (1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica GN=Os07g0638300 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.456e-89
Identity = 154/219 (70.32%), Postives = 177/219 (80.82%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD+VPNL++ +  G  ++HDF+GD + I+FSHPGDFTPVCTTEL  MA Y  EFDKR VKLLG+SCDDV+SH +WIKDIEAY PG +V+YPI+ADP+RE IKQLNMVDPDEKDS+G  LPSRALHIVGPD +VKLSFLYPA  GRNMDEVVRA+D+LQ A KH VATP NWK G+          D+AKE FPQGF+T DLPS K YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSI (1-Cys peroxiredoxin A OS=Oryza sativa subsp. indica GN=OsI_27030 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 7.145e-89
Identity = 153/219 (69.86%), Postives = 177/219 (80.82%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD+VPNL++ +  G  ++HDF+GD + I+FSHPGDFTPVCTTEL  MA Y  EFDKR VKLLG+SCDDV+SH +WIKDIEAY PG +V+YPI+ADP+RE IKQLNMVDPDEKDS+G  LPSRALHIVGPD +VKLSFLYP+  GRNMDEVVRA+D+LQ A KH VATP NWK G+          D+AKE FPQGF+T DLPS K YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYIILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPSCVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_WHEAT (1-Cys peroxiredoxin PER1 OS=Triticum aestivum GN=PER1 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.120e-87
Identity = 152/219 (69.41%), Postives = 176/219 (80.37%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD+VPNL++ +  G  ++HD++G+ + I+FSHPGDFTPVCTTEL  MA Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD +VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANW  G+          D+AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEG-QLPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWNPGECVVIAPGVSDDEAKKMFPQGFETADLPSKKGYLRFTKV 218          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_HORVU (1-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER1 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.734e-87
Identity = 152/219 (69.41%), Postives = 176/219 (80.37%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD+VPNL++ +  G  ++HD++G+ + I+FSHPGDFTPVCTTEL  MA Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD  VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANWK G+          ++AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAQG-QLPSRTLHIVGPDKVVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPGECVVIAPGVSDEEAKKMFPQGFETADLPSKKGYLRFTKV 218          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_MAIZE (1-Cys peroxiredoxin PER1 OS=Zea mays GN=PER1 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.885e-81
Identity = 143/229 (62.45%), Postives = 176/229 (76.86%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY--------TPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKH--KVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLTIGD+VPNL++ +  G  ++HD++GD + IIFSHP DFTPVCTTE+  MA Y  EF+KR VKLLG+SCDDV+SH +W KD+EAY            KV++PI+ADP R+ I+QLNMVDPDEKD++G+ +PSRALH+VGPD  VKLSFLYPA+TGRNMDEV+RA+DSL  A KH  KVATPANWK G+          ++A++ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGDGYAIIFSHPADFTPVCTTEMAAMAGYAKEFEKRGVKLLGISCDDVESHRQWTKDVEAYGGKQQQQQATTTKVTFPILADPARDAIRQLNMVDPDEKDAAGRSMPSRALHVVGPDKAVKLSFLYPATTGRNMDEVLRAVDSLLTAAKHGGKVATPANWKPGECAVIAPGVSDEEARKMFPQGFETADLPSKKGYLRFTKV 229          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHYB_ORYSJ (1-Cys peroxiredoxin B OS=Oryza sativa subsp. japonica GN=Os07g0638400 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.885e-81
Identity = 141/219 (64.38%), Postives = 170/219 (77.63%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLT+GD VP+L++ T  G  +LHDF+GD + IIFSHP DFTPVCTTEL +MA Y  EFDKR VKLLG SCDDV+SH +WIKDIEAY PG +V +PI+ADP+RE I+QLNM+D DEKD++G +LP+RALHIVGPD +VKLSFL+PA TGRNM EV+RA D+L  A +H+VATP NWK G+          ++AK  FP GFET  LPS K YLRFT V
Sbjct:    1 MPGLTLGDVVPDLELDTTHGKIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEEAKARFPAGFETAQLPSNKCYLRFTQV 219          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHYB_ORYSI (1-Cys peroxiredoxin B OS=Oryza sativa subsp. indica GN=OsI_026085 PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.885e-81
Identity = 141/219 (64.38%), Postives = 170/219 (77.63%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPGLT+GD VP+L++ T  G  +LHDF+GD + IIFSHP DFTPVCTTEL +MA Y  EFDKR VKLLG SCDDV+SH +WIKDIEAY PG +V +PI+ADP+RE I+QLNM+D DEKD++G +LP+RALHIVGPD +VKLSFL+PA TGRNM EV+RA D+L  A +H+VATP NWK G+          ++AK  FP GFET  LPS K YLRFT V
Sbjct:    1 MPGLTLGDVVPDLELDTTHGKIRLHDFVGDAYAIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEEAKARFPAGFETAQLPSNKCYLRFTQV 219          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_ARATH (1-Cys peroxiredoxin PER1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.199e-81
Identity = 145/221 (65.61%), Postives = 171/221 (77.38%), Query Frame = 2
Query:   17 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKH--KVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            MPG+T+GD+VPNL+V+T    FKLHD+  ++WT++FSHPGDFTPVCTTELG MA Y  EFDKR VKLLGLSCDDV+SH +WIKDIEA+  G KV+YPIIADPN+EII QLNM+DP E        PSRALHIVGPD ++KLSFLYP++TGRNMDEV+RALDSL  A KH  K+ATP NWK             ++AK+ FPQGF+T DLPSKK YLR T V
Sbjct:    1 MPGITLGDTVPNLEVETTHDKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENG------PSRALHIVGPDSKIKLSFLYPSTTGRNMDEVLRALDSLLMASKHNNKIATPVNWKPDQPVVISPAVSDEEAKKMFPQGFKTADLPSKKGYLRHTEV 215          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: REHY_BROSE (Probable 1-Cys peroxiredoxin (Fragment) OS=Bromus secalinus PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.547e-78
Identity = 139/203 (68.47%), Postives = 161/203 (79.31%), Query Frame = 2
Query:   65 TNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFTNV 673
            +  G  ++HD++ + + I+FSHPGDFTPVCTTEL  MA Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD +VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANWK G+          ++AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 STHGKIRIHDYVANGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEG-QLPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPGECVVIAPGVSDEEAKKLFPQGFETKDLPSKKGYLRFTKV 202          
The following BLAST results are available for this feature:
BLAST of CX675404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
REHY_MEDTR1.258e-9373.971-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV... [more]
REHYA_ORYSJ2.456e-8970.321-Cys peroxiredoxin A OS=Oryza sativa subsp. japon... [more]
REHYA_ORYSI7.145e-8969.861-Cys peroxiredoxin A OS=Oryza sativa subsp. indic... [more]
REHY_WHEAT5.120e-8769.411-Cys peroxiredoxin PER1 OS=Triticum aestivum GN=P... [more]
REHY_HORVU8.734e-8769.411-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER... [more]
REHY_MAIZE1.885e-8162.451-Cys peroxiredoxin PER1 OS=Zea mays GN=PER1 PE=2 ... [more]
REHYB_ORYSJ1.885e-8164.381-Cys peroxiredoxin B OS=Oryza sativa subsp. japon... [more]
REHYB_ORYSI1.885e-8164.381-Cys peroxiredoxin B OS=Oryza sativa subsp. indic... [more]
REHY_ARATH4.199e-8165.611-Cys peroxiredoxin PER1 OS=Arabidopsis thaliana G... [more]
REHY_BROSE2.547e-7868.47Probable 1-Cys peroxiredoxin (Fragment) OS=Bromus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675404 ID=CX675404; Name=CX675404; organism=Citrus sinensis; type=EST; length=674bp
TCTCTTTGCTTTCAAAATGCCTGGCCTCACAATTGGAGATTCTGTTCCCA
ACCTTCAAGTCCAAACCAATCAAGGAAACTTTAAGCTTCATGACTTCATC
GGTGATAACTGGACCATTATCTTCTCTCACCCAGGTGATTTCACTCCTGT
GTGCACAACTGAACTTGGCAAGATGGCTGCTTATGTTCCAGAGTTTGATA
AGAGAGAAGTGAAGCTTCTGGGTTTGTCCTGTGATGACGTTAAGTCACAC
AATGAGTGGATCAAAGACATTGAAGCCTACACACCTGGTTGCAAGGTCTC
ATATCCAATCATCGCAGATCCCAATCGAGAGATCATCAAGCAACTCAACA
TGGTGGACCCGGATGAAAAAGATTCATCAGGAAAGCAGCTCCCTTCTCGA
GCCCTTCATATCGTGGGCCCTGATCATCAGGTGAAACTGAGCTTTCTTTA
CCCGGCGTCGACTGGCCGGAACATGGATGAAGTAGTAAGGGCATTGGACT
CTCTGCAGAAGGCACTGAAGCATAAGGTTGCAACGCCTGCAAACTGGAAG
CAGGGAGATCCGGTGGTGATATCACCAAGTGTGTCTAGTGATCAAGCCAA
AGAGACGTTCCCTCAAGGTTTTGAGACTGTGGATCTTCCATCCAAGAAAG
AGTACTTGCGTTTCACCAATGTCT
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