CX675403

Overview
NameCX675403
Unique NameCX675403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4345 contig Csv1_Contig4345:1..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_MEDTR (1-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.010e-92
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD +P+ +V TTQG  KLH F  D+WTI+FSHPGDFTPVCTTELGK A Y  EF+KR V LLG+SCDD++SH EWIKDIEA+TPG KV+YPII+DP REIIKQLNMVDPDEKDS+G  LPSRALHIVGPD ++KLSFLYPA TGRNMDEV+R ++SLQKA K+K+ATPANWK G+         +DQAKE FPQGF+T DLPSKKEYLRFTNV
Sbjct:    1 MPGLTIGDTIPDLEVDTTQGKIKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEFNKRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDSNG-NLPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKYKIATPANWKPGEPVVISPDVTNDQAKEMFPQGFKTADLPSKKEYLRFTNV 218          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSJ (1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica GN=Os07g0638300 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.971e-88
Identity = 153/219 (69.86%), Postives = 175/219 (79.91%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD VPN ++ +T G  ++HDF+GD + I+FSHPGDFTPVCTTEL   A Y  EFDKR VKLLG+SCDDV+SH +WIKDIEAY PG +V+YPI+ADP+RE IKQLNMVDPDEKDS+G  LPSRALHIVGPD +VKLSFLYPA  GRNMDEVVRA+D+LQ A KH VATP NWK G+          D+AKE FPQGF+T DLPS K YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSI (1-Cys peroxiredoxin A OS=Oryza sativa subsp. indica GN=OsI_27030 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.734e-88
Identity = 152/219 (69.41%), Postives = 175/219 (79.91%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD VPN ++ +T G  ++HDF+GD + I+FSHPGDFTPVCTTEL   A Y  EFDKR VKLLG+SCDDV+SH +WIKDIEAY PG +V+YPI+ADP+RE IKQLNMVDPDEKDS+G  LPSRALHIVGPD +VKLSFLYP+  GRNMDEVVRA+D+LQ A KH VATP NWK G+          D+AKE FPQGF+T DLPS K YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDFVGDTYIILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPSCVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIPPGVSDDEAKEKFPQGFDTADLPSGKGYLRFTKV 219          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_WHEAT (1-Cys peroxiredoxin PER1 OS=Triticum aestivum GN=PER1 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.109e-86
Identity = 151/219 (68.95%), Postives = 174/219 (79.45%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD VPN ++ +T G  ++HD++G+ + I+FSHPGDFTPVCTTEL   A Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD +VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANW  G+          D+AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEG-QLPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWNPGECVVIAPGVSDDEAKKMFPQGFETADLPSKKGYLRFTKV 218          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_HORVU (1-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.009e-86
Identity = 151/219 (68.95%), Postives = 174/219 (79.45%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD VPN ++ +T G  ++HD++G+ + I+FSHPGDFTPVCTTEL   A Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD  VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANWK G+          ++AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAQG-QLPSRTLHIVGPDKVVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPGECVVIAPGVSDEEAKKMFPQGFETADLPSKKGYLRFTKV 218          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHYB_ORYSJ (1-Cys peroxiredoxin B OS=Oryza sativa subsp. japonica GN=Os07g0638400 PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.789e-81
Identity = 140/219 (63.93%), Postives = 169/219 (77.17%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLT+GD VP+ ++ TT G  +LHDF+GD + IIFSHP DFTPVCTTEL + A Y  EFDKR VKLLG SCDDV+SH +WIKDIEAY PG +V +PI+ADP+RE I+QLNM+D DEKD++G +LP+RALHIVGPD +VKLSFL+PA TGRNM EV+RA D+L  A +H+VATP NWK G+          ++AK  FP GFET  LPS K YLRFT V
Sbjct:    1 MPGLTLGDVVPDLELDTTHGKIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEEAKARFPAGFETAQLPSNKCYLRFTQV 219          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHYB_ORYSI (1-Cys peroxiredoxin B OS=Oryza sativa subsp. indica GN=OsI_026085 PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.789e-81
Identity = 140/219 (63.93%), Postives = 169/219 (77.17%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLT+GD VP+ ++ TT G  +LHDF+GD + IIFSHP DFTPVCTTEL + A Y  EFDKR VKLLG SCDDV+SH +WIKDIEAY PG +V +PI+ADP+RE I+QLNM+D DEKD++G +LP+RALHIVGPD +VKLSFL+PA TGRNM EV+RA D+L  A +H+VATP NWK G+          ++AK  FP GFET  LPS K YLRFT V
Sbjct:    1 MPGLTLGDVVPDLELDTTHGKIRLHDFVGDAYAIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEEAKARFPAGFETAQLPSNKCYLRFTQV 219          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_MAIZE (1-Cys peroxiredoxin PER1 OS=Zea mays GN=PER1 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.512e-80
Identity = 142/229 (62.01%), Postives = 174/229 (75.98%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY--------TPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKH--KVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPGLTIGD VPN ++ +T G  ++HD++GD + IIFSHP DFTPVCTTE+   A Y  EF+KR VKLLG+SCDDV+SH +W KD+EAY            KV++PI+ADP R+ I+QLNMVDPDEKD++G+ +PSRALH+VGPD  VKLSFLYPA+TGRNMDEV+RA+DSL  A KH  KVATPANWK G+          ++A++ FPQGFET DLPSKK YLRFT V
Sbjct:    1 MPGLTIGDTVPNLELDSTHGKIRIHDYVGDGYAIIFSHPADFTPVCTTEMAAMAGYAKEFEKRGVKLLGISCDDVESHRQWTKDVEAYGGKQQQQQATTTKVTFPILADPARDAIRQLNMVDPDEKDAAGRSMPSRALHVVGPDKAVKLSFLYPATTGRNMDEVLRAVDSLLTAAKHGGKVATPANWKPGECAVIAPGVSDEEARKMFPQGFETADLPSKKGYLRFTKV 229          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_ARATH (1-Cys peroxiredoxin PER1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.369e-80
Identity = 144/221 (65.16%), Postives = 169/221 (76.47%), Query Frame = -3
Query:   97 MPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKH--KVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 753
            MPG+T+GD VPN +V+TT   FKLHD+  ++WT++FSHPGDFTPVCTTELG  A Y  EFDKR VKLLGLSCDDV+SH +WIKDIEA+  G KV+YPIIADPN+EII QLNM+DP E        PSRALHIVGPD ++KLSFLYP++TGRNMDEV+RALDSL  A KH  K+ATP NWK             ++AK+ FPQGF+T DLPSKK YLR T V
Sbjct:    1 MPGITLGDTVPNLEVETTHDKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENG------PSRALHIVGPDSKIKLSFLYPSTTGRNMDEVLRALDSLLMASKHNNKIATPVNWKPDQPVVISPAVSDEEAKKMFPQGFKTADLPSKKGYLRHTEV 215          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: REHY_BROSE (Probable 1-Cys peroxiredoxin (Fragment) OS=Bromus secalinus PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.119e-78
Identity = 139/203 (68.47%), Postives = 161/203 (79.31%), Query Frame = -3
Query:   97 TTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFTNV 705
            +T G  ++HD++ + + I+FSHPGDFTPVCTTEL   A Y  EF+KR VKLLG+SCDDV+SH EW KDIEAY PG KV+YPI+ADP+R  IKQLNMVDPDEKD+ G QLPSR LHIVGPD +VKLSFLYP+ TGRNMDEVVRA+DSL  A KHKVATPANWK G+          ++AK+ FPQGFET DLPSKK YLRFT V
Sbjct:    1 STHGKIRIHDYVANGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEG-QLPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPGECVVIAPGVSDEEAKKLFPQGFETKDLPSKKGYLRFTKV 202          
The following BLAST results are available for this feature:
BLAST of CX675403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
REHY_MEDTR1.010e-9273.521-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV... [more]
REHYA_ORYSJ1.971e-8869.861-Cys peroxiredoxin A OS=Oryza sativa subsp. japon... [more]
REHYA_ORYSI5.734e-8869.411-Cys peroxiredoxin A OS=Oryza sativa subsp. indic... [more]
REHY_WHEAT4.109e-8668.951-Cys peroxiredoxin PER1 OS=Triticum aestivum GN=P... [more]
REHY_HORVU7.009e-8668.951-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER... [more]
REHYB_ORYSJ6.789e-8163.931-Cys peroxiredoxin B OS=Oryza sativa subsp. japon... [more]
REHYB_ORYSI6.789e-8163.931-Cys peroxiredoxin B OS=Oryza sativa subsp. indic... [more]
REHY_MAIZE1.512e-8062.011-Cys peroxiredoxin PER1 OS=Zea mays GN=PER1 PE=2 ... [more]
REHY_ARATH3.369e-8065.161-Cys peroxiredoxin PER1 OS=Arabidopsis thaliana G... [more]
REHY_BROSE4.119e-7868.47Probable 1-Cys peroxiredoxin (Fragment) OS=Bromus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675403 ID=CX675403; Name=CX675403; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTATTGTATAATATATCAACGAACGTATATGACATGCATGGTC
AACTATTTATCTATTGCTTAGCTAAATGGAAACTGGTGAAGCTTTAGACA
TTGGTGAAACGCAAGTACTCTTTCTTGGATGGAAGATCCACAGTCTCAAA
ACCTTGAGGGAACGTCTCTTTGGCTTGATCACTAGACACACTTGGTGATA
TCACCACCGGATCTCCCTGCTTCCAGTTTGCAGGCGTTGCAACCTTATGC
TTCAGTGCCTTCTGCAGAGAGTCCAATGCCCTTACTACTTCATCCATGTT
CCGGCCAGTCGACGCCGGGTAAAGAAAGCTCAGTTTCACCTGATGATCAG
GGCCCACGATATGAAGGGCTCGAGAAGGGAGCTGCTTTCCTGATGAATCT
TTTTCATCCGGGTCCACCATGTTGAGTTGCTTGATGATCTCTCGATTGGG
ATCTGCGATGATCGGATATGAGACCTTGCAACCAGGTGTGTAGGCTTCAA
TGTCTTTGATCCACTCATTGTGTGACTTAACGTCATCACAGGACAAACCC
AGAAGCTTCACTTCTCTCTTATCAAACTCTGGAACATAAGCTGCCCTCTT
GCCAAGTTCAGTTGTGCACACAGGAGTGAAATCACCTGGGTGAGAGAAGA
TAATGGTCCAGTTATCACCGATGAAGTCATGAAGCTTAAAGTTTCCTTGA
GTGGTTTGGACTTGAAAGTTGGGAACACAATCTCCAATTGTGAGGCCAGG
CATTTTGA
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