CK937941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34 Identity = 69/88 (78.41%), Postives = 79/88 (89.77%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTDGDV 269 L++PLLI+IAK M +HPLLLMVPGAIGAQF+FLLPTGTPSN+VGFTTGHIEI+DMIKTGLPLKIAG ++ LMPTLGAYVF + G V Sbjct: 453 LLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIKDMIKTGLPLKIAGTIFLSILMPTLGAYVFASMGGV 540
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 33/82 (40.24%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 251 + LP+L ++A +HVHPL LM+PG +G ++F+LP TP N + F+TGH+ ++DM++TGL + + G+ ++ M T +F Sbjct: 488 IFLPVLAELAIRLHVHPLYLMIPGTVGCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIF 569
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.166e-15 Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 251 + LP+L ++A +HVHPL LM+PG + ++F+LP TP N + F+TGH+ ++DM++TGL + + G+ ++ M T +F Sbjct: 488 IFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQAIF 569
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 32/82 (39.02%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 251 + LP+L ++A + VHPL LM+PG +G F+F+LP TP N + F +GH+ ++DM++TGL + + G+ ++ M T +F Sbjct: 490 IFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIF 571
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 260 L LP+ +A+++ +HPL +M+P + A +F+LP TP N + F GH+++ DM+KTGL + I GIA++ + T G VF D Sbjct: 475 LFLPIFASMARSIGIHPLYVMIPCTLSASLAFMLPVATPPNAIVFAYGHLKVIDMVKTGLVMNILGIASVFLSVNTWGRAVFNLD 559
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12 Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 260 L LP+ +++++ ++PL +M+P + A F+F+LP TP N + FT GH+++ DM+KTG+ + I G+ + + T G +F D Sbjct: 471 LFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLKVADMVKTGVIMNIIGVFCVFLAVNTWGRAIFDLD 555
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 260 L LP+ +A+++ +HPL +M+P + A +F+LP TP N + F GH+ + DM+KTGL + GI ++ + T G +F D Sbjct: 475 LFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVDMMKTGLIMNFVGILSVFLSVNTWGRAMFNLD 559
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12 Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAM-----AFLMPTLGAYVF 251 L LP+L +A+ +HV+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + +++P Y + Sbjct: 496 LFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNIVGVAVVMLGICTWIVPMFDLYTY 582
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11 Identity = 28/85 (32.94%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 260 + LP+L +++T+H++PL ++P + F+ +LP G P N + F+ GH +I+DM+K GL + + G+ + + T G +F D Sbjct: 527 IFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWGVSLFHLD 611
BLAST of CK937941 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11 Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 6 LVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 260 ++LP+L ++ ++VHPLLLMVP A+ A +++LP GTP N + F TG I I+ M G + + I + ++ L V G D Sbjct: 427 MILPILATLSVAVNVHPLLLMVPAAMAANCAYMLPVGTPPNAIVFGTGKISIKKMASVGFWVNLLSIVVIVLVVYFLVPPVLGID 511 The following BLAST results are available for this feature:
BLAST of CK937941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937941 ID=CK937941; Name=CK937941; organism=Citrus sinensis; type=EST; length=490bpback to top |