CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5497 contig Csv1_Contig5497:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: ATK1_ARATH (Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.164e-81
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = -3
Query:  274 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 807
            TI DVCS+ +ISSLL+QAAQSRSVGKTQMNE SSRSHFVFT+RI GVNE+TEQQVQGVLNLIDLAGSERLS+SGATGDRLKETQAINKSLS+LSDVIFALAKKEDH+P+RNSKLTYLLQPCLG DSKTLMFVNISPD  S GESLCSLRFAARVNACEIG+P RQ + K  DSRLSYG
Sbjct:  616 TIFDVCSVGKISSLLQQAAQSRSVGKTQMNEQSSRSHFVFTMRISGVNESTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSALSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPTSAGESLCSLRFAARVNACEIGIPRRQTSTKLLDSRLSYG 793          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.736e-75
Identity = 144/178 (80.90%), Postives = 159/178 (89.33%), Query Frame = -3
Query:  274 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 807
            TI+DV S  E+S LL  AA++RSVGKTQMNE SSRSHFVFTLRI GVNE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVIFALAKKEDH+P+RNSKLTYLLQPCLG D+KTLMFVNI+P+S S GESLCSLRFAARVNACEIG P RQ  +K  ++RLS G
Sbjct:  577 TILDVKSSREVSFLLDHAARNRSVGKTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDAKTLMFVNIAPESSSTGESLCSLRFAARVNACEIGTPRRQTNIKPLENRLSLG 754          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: ATK2_ARATH (Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.432e-71
Identity = 138/178 (77.53%), Postives = 153/178 (85.96%), Query Frame = -3
Query:  274 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 807
            T+VDV S  ++S LL  AA++RSVGKT MNE SSRSHFVFTL+I G NE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVIFALAKKEDH+P+RNSKLTYLLQPCLG DSKTLMFVNI+P+  S GESLCSLRFAARVNACEIG   R +  +  D RLS G
Sbjct:  568 TVVDVRSSKQVSFLLDHAARNRSVGKTAMNEQSSRSHFVFTLKISGFNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNITPEPSSTGESLCSLRFAARVNACEIGTAHRHVNARPLDYRLSLG 745          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2_DICDI (Kinesin-related protein 2 OS=Dictyostelium discoideum GN=kif2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.175e-49
Identity = 103/165 (62.42%), Postives = 126/165 (76.36%), Query Frame = -3
Query:  313 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQ 807
            T+V V   S++  LL  A ++RSV KT  NE SSRSH VF L++ G N+ + ++ QG+LNLIDLAGSER+SRSG  G +LKETQAINKSLSSL DVI ALA KE HIPYRNSKLT+LLQ  +G +SKTLMFVNISP+   + ES  SLRFAA+VN+CE+G   +Q
Sbjct:  625 TVVPVTHPSQVYELLNLANKNRSVAKTLCNERSSRSHTVFQLKLIGYNQQSSERTQGLLNLIDLAGSERVSRSGVEGKQLKETQAINKSLSSLGDVISALANKEQHIPYRNSKLTFLLQNSIGGNSKTLMFVNISPELKDLQESTSSLRFAAKVNSCELGAARKQ 789          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLPA_EMENI (Kinesin-like protein klpA OS=Emericella nidulans GN=klpA PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 97/171 (56.73%), Postives = 122/171 (71.35%), Query Frame = -3
Query:  301 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL--AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLK 807
            T V + S   + SLL++AA +RSV  T+ NE SSRSH +F L++ G N  T ++ +G LNL+DLAGSERLS SGATGDRLKETQ IN+SLS L DVI AL   KK+ HIPYRNSKLTYLLQ  LG +SKTLMFV +SP    + E+L SL+FA +V+   IG   +Q  ++
Sbjct:  591 TTVQLESPEMVESLLKRAAANRSVAATKANERSSRSHSIFILKLIGENYITGERSEGTLNLVDLAGSERLSHSGATGDRLKETQNINRSLSCLGDVIAALGQGKKDGHIPYRNSKLTYLLQFSLGGNSKTLMFVMVSPLQAHLSETLTSLKFATKVHNTHIGTAKKQTRVR 761          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: CTK2_XENLA (Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.177e-41
Identity = 92/158 (58.23%), Postives = 114/158 (72.15%), Query Frame = -3
Query:  328 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 801
            V V  + E+  LL+ A  +RSV KT +N+ SSRSH VF L+I G N+  + +   +++LIDLAGSERL RS +TGDRLKETQ IN SLS+L  VI +L  K+ HIPYRNSKLTYLLQ  LG ++K LMFVNISP   +  ESL SLRFA++VN C IG
Sbjct:  479 VKVSCVEEVHELLKIAKANRSVAKTAINDRSSRSHSVFQLKIEGENKQRDLKTSSMISLIDLAGSERLDRSLSTGDRLKETQCINTSLSTLGMVITSLCNKDSHIPYRNSKLTYLLQNSLGGNAKVLMFVNISPLEENFAESLNSLRFASKVNECVIG 636          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP2_SCHPO (Kinesin-like protein 2 OS=Schizosaccharomyces pombe GN=klp2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.968e-41
Identity = 96/160 (60.00%), Postives = 117/160 (73.12%), Query Frame = -3
Query:  307 EISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL--AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLT 780
            +++ LL QA+++RSV  T  NE+SSRSH VF L + G N  T +  +  LNLIDLAGSERLS S + G+RLKETQAINKSLS L DVI AL   K+  +IPYRNSKLT LLQ  LG +SKTLMFVNISP    V E+LCSLRFA +VN  +IG  +R++T
Sbjct:  658 QVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNLLQYSLGGNSKTLMFVNISPLKQHVPETLCSLRFATKVNNTQIGT-ARKVT 816          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP1_SCHPO (Kinesin-like protein 1 OS=Schizosaccharomyces pombe GN=klp1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39
Identity = 90/167 (53.89%), Postives = 114/167 (68.26%), Query Frame = -3
Query:  328 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL-------AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 807
            +I+D      +  +L +A ++R +  T+ NE SSRSH VF L I G N  T+Q  +G LNL+DLAGSERLS S A GDRL+ETQAINKSLS L DVI AL        K++ HIPYRNSKLTYLL+  LG+ +KTLMFVN+SP      ++L SLRFA +VN  ++G
Sbjct:  659 SIIDFNEEDTVYKMLNRAGENRFIAATKANERSSRSHTVFMLYIDGENSRTKQICKGTLNLVDLAGSERLSYSQAVGDRLRETQAINKSLSCLGDVIHALGNASNSTTKEKSHIPYRNSKLTYLLKYSLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVNDTKVG 825          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC1_RAT (Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.218e-38
Identity = 93/162 (57.41%), Postives = 109/162 (67.28%), Query Frame = -3
Query:  328 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 801
            V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  525 VPVSCEKEVEALLHLAQQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLTLGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 686          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC1_CRIGR (Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.630e-38
Identity = 92/162 (56.79%), Postives = 109/162 (67.28%), Query Frame = -3
Query:  328 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 801
            V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQ+IN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  454 VPVSCEREVEALLHLAHQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCVAPLNLVDLAGSERLDPGLTLGPGERDRLRETQSINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 615          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
ATK1_ARATH1.164e-8186.52Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=... [more]
ATK3_ARATH4.736e-7580.90Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
ATK2_ARATH2.432e-7177.53Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=... [more]
KIF2_DICDI1.175e-4962.42Kinesin-related protein 2 OS=Dictyostelium discoid... [more]
KLPA_EMENI2.146e-4356.73Kinesin-like protein klpA OS=Emericella nidulans G... [more]
CTK2_XENLA1.177e-4158.23Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 ... [more]
KLP2_SCHPO9.968e-4160.00Kinesin-like protein 2 OS=Schizosaccharomyces pomb... [more]
KLP1_SCHPO4.188e-3953.89Kinesin-like protein 1 OS=Schizosaccharomyces pomb... [more]
KIFC1_RAT1.218e-3857.41Kinesin-like protein KIFC1 OS=Rattus norvegicus GN... [more]
KIFC1_CRIGR4.630e-3856.79Kinesin-like protein KIFC1 OS=Cricetulus griseus P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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