CX675397

Overview
NameCX675397
Unique NameCX675397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6417 contig Csv1_Contig6417:453..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675397 vs. ExPASy Swiss-Prot
Match: YQJG_ECOLI (Uncharacterized protein yqjG OS=Escherichia coli (strain K12) GN=yqjG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 9.081e-56
Identity = 74/125 (59.20%), Postives = 94/125 (75.20%), Query Frame = 3
Query:    6 ASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQRYICGNRLTEADIRLFVTL 380
            A  +YSG+ TVPVLWDKK  TIV+NESAEIIRMFNT F+ +   A  D +P   + +ID  N WIY+ +NNGVY+ GFAT Q  YDEAV +V+E+L + E+ILG+ RY+ GN+LTEADIRL+ TL
Sbjct:  123 ADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTL 246          

HSP 2 Score: 87.8113 bits (216), Expect = 9.081e-56
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  379 LRFDEVYAVHFKCNKKLLREYPNLFNYTKDIYQIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGP--DID 588
            +RFD VY  HFKC+K  + +Y NL+ + +DIYQ+P ++ TVN  HI+ HY+ SH +INP GII +GP  D+D
Sbjct:  247 VRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLD 318          
BLAST of CX675397 vs. ExPASy Swiss-Prot
Match: GTO2_SCHPO (Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe GN=gto2 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.251e-44
Identity = 64/130 (49.23%), Postives = 91/130 (70.00%), Query Frame = 3
Query:    6 ASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENAS---LDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL--GKQRYICGNRLTEADIRLFVTL 380
            A  NY+ +FTVPVLWD K  TIVNNESAEIIRMFN  FN++ E+     +DL+PS  R +ID  N++ Y+ +NNGVY+ GFAT    Y++ V+ V++ LD+ E++L   K  ++ G+ LTE D+RL+ T+
Sbjct:  108 ADPNYNMRFTVPVLWDSKYNTIVNNESAEIIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDELNDYFYDTVNNGVYKTGFATTAEAYEKNVRVVFQGLDRLEQVLKESKGPFLLGDHLTETDVRLYTTI 237          

HSP 2 Score: 66.6254 bits (161), Expect = 2.251e-44
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 1
Query:  379 LRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGP 579
            +RFD VY  HFKCN   +R  YP++  + K +Y + P+   T + +HIK HY  SH  INP GI PLGP
Sbjct:  238 VRFDPVYVQHFKCNIGTIRHNYPHINQWLKRLYWKHPAFHETTDFKHIKCHYTQSHTQINPLGITPLGP 306          
BLAST of CX675397 vs. ExPASy Swiss-Prot
Match: GTO2_YEAST (Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae GN=ECM4 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.768e-37
Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 3
Query:   18 YSGKFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILG------KQRY-------------ICGNRLTEADIRLFVTL 380
            YS +FTVPVLWD + +TIVNNES+EIIR+ N+    EF D  ++   DL P+  + QID  N W+Y+ INNGVY+ GFA K   Y+  V  V+E LDK E+IL       K +Y               G++LTEADIRL+ T+
Sbjct:  152 YSARFTVPVLWDLETQTIVNNESSEIIRILNSSAFDEFVD-DDHKKTDLVPAQLKTQIDDFNSWVYDSINNGVYKTGFAEKAEVYESEVNNVFEHLDKVEKILSDKYSKLKAKYGEEDRQKILGEFFTVGDQLTEADIRLYTTV 294          

HSP 2 Score: 62.003 bits (149), Expect = 1.768e-37
Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 1
Query:  379 LRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDID 588
            +RFD VY  HFKCN   +R  YP +  + +++Y    +   T +  HIK HY  SH  INP GI PLGP  D
Sbjct:  295 IRFDPVYVQHFKCNFTSIRAGYPFIHLWVRNLYWNYDAFRYTTDFDHIKLHYTRSHTRINPLGITPLGPKPD 366          
BLAST of CX675397 vs. ExPASy Swiss-Prot
Match: GTO1_YEAST (Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae GN=GTO1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.904e-29
Identity = 61/149 (40.94%), Postives = 81/149 (54.36%), Query Frame = 3
Query:    3 LASTNYSG-KFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL-------------GKQR-----YICGNRLTEADIRLFVTL 380
            L    Y G KFTVPVLWD K + IVNNES +IIR+ N+    EF    E   +DL P D  D+ID   +W++  IN GVY+ G A     Y+  VK ++E L K E +L              KQ+     ++ G RLTEADIRL+ ++
Sbjct:  129 LNDPKYPGTKFTVPVLWDSKTRKIVNNESGDIIRILNSGVFDEFIQSEETNVIDLVPHDLIDEIDKNIKWVHPKINLGVYKVGLAENGKIYETEVKTLFENLQKMECVLKENYKRLEEQFSGNKQKILAKYFVLGQRLTEADIRLYPSI 277          

HSP 2 Score: 52.7582 bits (125), Expect = 1.904e-29
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 1
Query:  373 SRLRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYG---SHPSINPYGIIPLGPDIDYS 594
            S +RFD VY  HFKCN K +R+ +P L  +  ++Y        T +  HIK  Y     S   IN +GI+PLGP  D S
Sbjct:  276 SIIRFDVVYVQHFKCNLKTIRDGFPYLHLWLINLYWNYAEFRFTTDFNHIKLFYIRMEVSRNKINQFGIVPLGPKPDIS 354          
BLAST of CX675397 vs. ExPASy Swiss-Prot
Match: GTO3_YEAST (Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae GN=GTO3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.570e-19
Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 3
Query:   15 NYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNTE-FNDIA--ENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQ------------------RYIC-GNRLTEADIRLFVTL 380
            +Y G+FTVPVLWD +  TIVNNES++II + N+  F++    E   + L P     QI   N W+Y+ INNGVY+ GFA     Y+  V  +++ LDK E +L K+                  RY   G+ LTEAD+RL+ T+
Sbjct:  147 DYKGRFTVPVLWDLETCTIVNNESSDIIGIMNSAAFDEFVGEEYRQVRLVPRSLEAQITEFNSWVYDKINNGVYKAGFAECAEVYEREVTSLFQYLDKLENLLDKKYTDLEAEYGKNNKDKILDRYFAIGDTLTEADVRLYPTI 290          
The following BLAST results are available for this feature:
BLAST of CX675397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YQJG_ECOLI9.081e-5659.20Uncharacterized protein yqjG OS=Escherichia coli (... [more]
GTO2_SCHPO2.251e-4449.23Glutathione S-transferase omega-like 2 OS=Schizosa... [more]
GTO2_YEAST1.768e-3745.83Glutathione S-transferase omega-like 2 OS=Saccharo... [more]
GTO1_YEAST1.904e-2940.94Glutathione S-transferase omega-like 1 OS=Saccharo... [more]
GTO3_YEAST3.570e-1939.58Glutathione S-transferase omega-like 3 OS=Saccharo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_62A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A03-B6-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675397 ID=CX675397; Name=CX675397; organism=Citrus sinensis; type=EST; length=595bp
AGCTCGCAAGTACAAACTACTCAGGGAAGTTCACTGTCCCCGTACTGTGG
GATAAGAAGTTGAAGACGATTGTTAATAATGAGAGTGCGGAGATAATCCG
CATGTTTAATACGGAATTCAATGATATAGCTGAAAATGCTTCTCTGGATC
TACATCCATCTGATCAGCGAGATCAAATTGATGGGACTAATGAATGGATA
TACAATGGGATAAACAATGGTGTTTATCGATGTGGGTTTGCAACAAAGCA
AGGACCTTATGATGAAGCTGTTAAGCAGGTGTACGAAGCATTGGACAAAT
GTGAAGAGATACTTGGCAAGCAACGATACATTTGTGGAAACAGGCTGACT
GAAGCAGATATTCGGTTGTTTGTCACGCTTAAGATTTGATGAGGTTTATG
CAGTTCACTTCAAGTGCAACAAGAAACTATTACGAGAATATCCAAATCTG
TTCAACTACACCAAAGACATATATCAGATTCCCAGCATGTCTAGCACTGT
GAATATGCAACACATCAAGCGGCATTACTATGGGAGCCATCCTTCTATCA
ATCCATATGGGATCATCCCTCTTGGCCCTGATATCGATTATTCTT
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