CX675395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 5.570e-37 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAF 629 YHSS +D + TK G LLPL+S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P S++E E+ R YL+Q+R+ET RL + P + P+KWW F Sbjct: 4 YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCF 163
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.274e-37 Identity = 77/163 (47.24%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAF 629 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCF 163
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.274e-37 Identity = 77/163 (47.24%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAF 629 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCF 163
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_CAEEL (Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.049e-30 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACGCPL--LPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEK-VPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAF 629 YHS F E V + LP++++ KGPAP ++QD DI+DEA+T+F+ N+FFR F+IK AD+ +IYL FYI L++L+ G K + L L +P+PGE FP ++ PQS+ + + R YL+QIR+E RL +A+ P P+KWWL F Sbjct: 4 YHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTNQD--DIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQDRPSKWWLCF 166
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe GN=arc3 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30 Identity = 69/162 (42.59%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACGCPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAF 629 YHSSF+ V +LPLK+ +GPA +D+ + DI+DE I FRAN FFRNF+IK AD+ LIY T +I+ L R+ G + + + +L LE +PG FP L+A P S ++AE+ R YL Q R+E + RLLS Y P+KWW F Sbjct: 4 YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNG-LNYRDAERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCF 164
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.125e-29 Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 141 MVYHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRPN-GTPNKWWLAF 629 MVYHS F DE + G P+LPLK+ KGPAP D + DI+DEA+ F+AN+ FRNF+++ + D++LIYLT YI L ++ A+ KA+ + E+ +PGE FP GL +P ++ A+ R Y Q+R E RL Y + NKWW+ F Sbjct: 1 MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNFEVQGNGDRVLIYLTLYITKCLLKI-APMNKADAEKALFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICF 164
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_YEAST (Actin-related protein 2/3 complex subunit 3 OS=Saccharomyces cerevisiae GN=ARC18 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 3 Query: 147 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALP-QSQKEAELFRNYLKQIREETSGRLLSVAYRPNGT---PNKWWLAF 629 YHS+F + + G LLPL + +GPA S+ D DI+DE + FRAN FF+NF+IKS AD++LIY +IN L L+ + E K + N+ L+ +PG P FP ++ +P Q +L + Y++Q R+E + RLL Y + P+K+WLAF Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSDY-DIIDECLDLFRANSFFKNFEIKSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSKEYPSKFWLAF 168
BLAST of CX675395 vs. ExPASy Swiss-Prot
Match: ARPC3_ENTHI (Probable actin-related protein 2/3 complex subunit 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 135 REMVYHSSFVDEEGVTKACGCPLLPLKSHIK-GPAPASDQDRTDIVDEAITFFRANVFFRNFDIK-SSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGL 491 R YHS +D++ V KA PL+ K+ +K P D DIVDEAIT+++ANVF++N D+ ADKLL YL FY+ L G RT + K +L +E +PG+ F G+ Sbjct: 5 RSGAYHSE-LDKDIVQKAGNFPLMQFKTKVKVNPKFLLKGDDMDIVDEAITYYKANVFYKNLDMSICEADKLLAYLMFYLQSLLLTFTG-RTKVDCDKMAFSLAIENFGLPGDGKFCLGGI 123 The following BLAST results are available for this feature:
BLAST of CX675395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675395 ID=CX675395; Name=CX675395; organism=Citrus sinensis; type=EST; length=629bpback to top |