CX675394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39 Identity = 82/170 (48.24%), Postives = 115/170 (67.65%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 649 YHSS +D + TK G LLPL+S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+ + + ++G K + LG+ P+PGEP FP ++A P S++E E+ R YL+Q+R+ET RL + P + P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 3.441e-39 Identity = 81/170 (47.65%), Postives = 115/170 (67.65%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 649 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+ + + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 3.441e-39 Identity = 81/170 (47.65%), Postives = 115/170 (67.65%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 649 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+ + + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe GN=arc3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32 Identity = 74/169 (43.79%), Postives = 100/169 (59.17%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACGCPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 649 YHSSF+ V +LPLK+ +GPA +D+ + DI+DE I FRAN FFRNF+IK AD+ LIY T +I+ L R G + + + +L LE +PG FP L+A P S ++AE+ R YL Q R+E + RLLS Y P+KWW F+KR+FMN Sbjct: 4 YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNG-LNYRDAERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMN 171
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32 Identity = 72/172 (41.86%), Postives = 101/172 (58.72%), Query Frame = -1 Query: 146 MVYHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRPN-GTPNKWWLAFAKRKFMN 655 MVYHS F DE + G P+LPLK+ KGPAP D + DI+DEA+ F+AN+ FRNF+++ + D++LIYLT YI L + A+ KA+ + E+ +PGE FP GL +P ++ A+ R Y Q+R E RL Y + NKWW+ F+KRKF+N Sbjct: 1 MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNFEVQGNGDRVLIYLTLYITKCLLK-IAPMNKADAEKALFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_CAEEL (Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/172 (41.86%), Postives = 106/172 (61.63%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACGCPL--LPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEK-VPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 649 YHS F E V + LP++++ KGPAP ++QD DI+DEA+T+F+ N+FFR F+IK AD+ +IYL FYI L++ + G K + L L +P+PGE FP ++ PQS+ + + R YL+QIR+E RL +A+ P P+KWWL FA+R+FM+ Sbjct: 4 YHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTNQD--DIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQDRPSKWWLCFARRRFMD 173
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_YEAST (Actin-related protein 2/3 complex subunit 3 OS=Saccharomyces cerevisiae GN=ARC18 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27 Identity = 67/173 (38.73%), Postives = 100/173 (57.80%), Query Frame = -1 Query: 146 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALP-QSQKEAELFRNYLKQIREETSGRLLSVAYRPNGT---PNKWWLAFAKRKFMN 649 YHS+F + + G LLPL + +GPA S+ D DI+DE + FRAN FF+NF+IKS AD++LIY +IN L + + E K + N+ L+ +PG P FP ++ +P Q +L + Y++Q R+E + RLL Y + P+K+WLAF +R+FMN Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSDY-DIIDECLDLFRANSFFKNFEIKSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSKEYPSKFWLAFTRRRFMN 175
BLAST of CX675394 vs. ExPASy Swiss-Prot
Match: ARPC3_ENTHI (Probable actin-related protein 2/3 complex subunit 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = -1 Query: 305 REMVYHSSFVDEEGVTKACGCPLLPLKSHIK-GPAPASDQDRTDIVDEAITFFRANVFFRNFDIK-SSADKLLIYLTFYINVALKRHEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGL 661 R YHS +D++ V KA PL+ K+ +K P D DIVDEAIT+++ANVF++N D+ ADKLL YL FY+ L G RT + K +L +E +PG+ F G+ Sbjct: 5 RSGAYHSE-LDKDIVQKAGNFPLMQFKTKVKVNPKFLLKGDDMDIVDEAITYYKANVFYKNLDMSICEADKLLAYLMFYLQSLLLTFTG-RTKVDCDKMAFSLAIENFGLPGDGKFCLGGI 123 The following BLAST results are available for this feature:
BLAST of CX675394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675394 ID=CX675394; Name=CX675394; organism=Citrus sinensis; type=EST; length=721bpback to top |