CK937889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_CITSI (Cytochrome c biogenesis protein ccsA OS=Citrus sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 1.281e-71 Identity = 137/148 (92.57%), Postives = 137/148 (92.57%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE IHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA Sbjct: 1 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYESLIFLSWSLSIIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein ccsA OS=Vitis vinifera GN=ccsA PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 5.408e-54 Identity = 109/148 (73.65%), Postives = 119/148 (80.41%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFSVVSI ITI+LIT LVDEI GL SSE+GM AT FC+TGLL+TRW+Y HFPLSDLYE IH + FK ++NHLSA+TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGYA Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHLITLLVDEIVGLSDSSEKGMIATFFCITGLLVTRWIYLGHFPLSDLYESLIFLSWSFSIIHIVPYFKKHKNHLSALTAPSAIFTQGFATSGLLTEMHQSEILVPALQSQWLMMHVSMMVLGYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein ccsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.573e-53 Identity = 104/148 (70.27%), Postives = 119/148 (80.41%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFS++SI ITI+LI+ VDEI GLY SSE+GMTAT FC+TGLL+TRW+YS HFPLSDLYE IH + FK ++N+LS ITAPS FTQGFATSG LT+MHQS I+VPALQ QWLMMHVSMM+LGYA Sbjct: 1 MIFSTLEHILTHISFSIISIVITIFLISLSVDEIVGLYDSSEKGMTATFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWSFSVIHMVPYFKKHKNYLSTITAPSTIFTQGFATSGLLTEMHQSEIVVPALQSQWLMMHVSMMILGYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_PLAOC (Cytochrome c biogenesis protein ccsA OS=Platanus occidentalis GN=ccsA PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.740e-52 Identity = 104/148 (70.27%), Postives = 116/148 (78.38%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIF TLE I THISFS+VSI ITI+L+T LVD I GLY SSE+GM AT C+TG L+TRW+YSRHFPLSDLYE IH + +N++NHLSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL YA Sbjct: 1 MIFLTLEHIFTHISFSIVSIVITIHLMTLLVDGIVGLYDSSEKGMIATFLCITGFLVTRWIYSRHFPLSDLYESLIFLSWSFSIIHMVPKIRNHKNHLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_CALFG (Cytochrome c biogenesis protein ccsA OS=Calycanthus floridus var. glaucus GN=ccsA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 5.062e-52 Identity = 103/148 (69.59%), Postives = 118/148 (79.73%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFS++SI ITI+L+ LV + GL SSE+GM AT FC+TGLL+TRW+YSRHFPLSDLYE IH + F+N++N LSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+LGYA Sbjct: 1 MIFSTLEHILTHISFSIISIVITIHLLNLLVHDTVGLCDSSEKGMMATFFCITGLLVTRWIYSRHFPLSDLYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMLLGYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_GOSHI (Cytochrome c biogenesis protein ccsA OS=Gossypium hirsutum GN=ccsA PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.473e-51 Identity = 107/152 (70.39%), Postives = 117/152 (76.97%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITF--LVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFSVVSI ITI+ +T LVDE+ GLY SSE+GM T FC+TGLL+TRW+YS HFPLSDLYE IH + FK +N+LSAITAPSA FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGYA Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPSAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYA 152
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_BUXMI (Cytochrome c biogenesis protein ccsA OS=Buxus microphylla GN=ccsA PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.281e-51 Identity = 103/147 (70.07%), Postives = 115/147 (78.23%), Query Frame = -1 Query: 6 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGY 446 MIF TLE ILTHISFS+VSI ITI+LIT LVDEI GLY S E+GM +T C+TGLL+TRW+YS H PLS+LYE IH I FKN++NHLS +TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y Sbjct: 1 MIFLTLEHILTHISFSIVSIVITIHLITLLVDEIVGLYDSLEKGMISTFLCITGLLVTRWIYSGHLPLSNLYESLIFLSWSFSIIHMIPYFKNHKNHLSLVTAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSY 147
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_GOSBA (Cytochrome c biogenesis protein ccsA OS=Gossypium barbadense GN=ccsA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 106/152 (69.74%), Postives = 116/152 (76.32%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITF--LVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFSVVSI ITI+ +T LVDE+ GLY SSE+GM T FC+TGLL+TRW+YS HFPLSDLYE IH + FK +N+LSAITAP A FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGYA Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYA 152
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_MORIN (Cytochrome c biogenesis protein ccsA OS=Morus indica GN=ccsA PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.309e-51 Identity = 104/148 (70.27%), Postives = 115/148 (77.70%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFSVVSI ITI+LIT LVDEI GLY S E+GM T FC+TGLL+TRW+Y R+ PLS+LYE IH + FK +N+L AITAPSA FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMMVLGYA Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHLITLLVDEIIGLYDSLEKGMMTTFFCITGLLMTRWIYLRYLPLSNLYESLIFLSWSFSIIHMVPYFKKYKNYLKAITAPSAIFTQGFATSGLLTEMHQSEILVPALQSHWLMMHVSMMVLGYA 148
BLAST of CK937889 vs. ExPASy Swiss-Prot
Match: CCSA_MANES (Cytochrome c biogenesis protein ccsA OS=Manihot esculenta GN=ccsA PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.309e-51 Identity = 103/148 (69.59%), Postives = 113/148 (76.35%), Query Frame = -1 Query: 3 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYA 446 MIFSTLE ILTHISFSVVSI ITI+LIT L DE LY SSE+GM T FC+TGLL+TRW++ H PLSDLYE IH + FK ++N LSAITAPS FFTQGFATSG LT MHQS ILVPALQ QWLMMHVSMM+LGYA Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHLITLLADEFVELYDSSEKGMITTFFCITGLLVTRWIFLGHLPLSDLYESLIFLSWSFSIIHMVPYFKKHKNFLSAITAPSTFFTQGFATSGLLTDMHQSEILVPALQSQWLMMHVSMMILGYA 148 The following BLAST results are available for this feature:
BLAST of CK937889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937889 ID=CK937889; Name=CK937889; organism=Citrus sinensis; type=EST; length=461bpback to top |