CK937869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_CITSI (30S ribosomal protein S18, chloroplastic OS=Citrus sinensis GN=rps18 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.344e-25 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLKEQRLITIAIKQARILS LPFLNNEKQFERSGLTARPPGLRTRKK Sbjct: 43 QGKILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_COFAR (30S ribosomal protein S18, chloroplastic OS=Coffea arabica GN=rps18 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.985e-21 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLIT+AIKQARILSLLPFLNNEKQFER+ TAR GLRTR K Sbjct: 43 QGKILSRRVNRLTLKQQRLITVAIKQARILSLLPFLNNEKQFERTESTARTTGLRTRNK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_PANGI (30S ribosomal protein S18, chloroplastic OS=Panax ginseng GN=rps18 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.362e-20 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILSLLPFLNN+KQFER+ TAR GLR RKK Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNDKQFERTESTARTAGLRARKK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_LACSA (30S ribosomal protein S18, chloroplastic OS=Lactuca sativa GN=rps18 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.323e-20 Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILSLLPFLNNEKQFER+ T R P LR RK+ Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_HELAN (30S ribosomal protein S18, chloroplastic OS=Helianthus annuus GN=rps18 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.323e-20 Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILSLLPFLNNEKQFER+ T R P LR RK+ Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_GUIAB (30S ribosomal protein S18, chloroplastic OS=Guizotia abyssinica GN=rps18 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.323e-20 Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILSLLPFLNNEKQFER+ T R P LR RK+ Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERTESTTRTPSLRARKR 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_VITVI (30S ribosomal protein S18, chloroplastic OS=Vitis vinifera GN=rps18 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.034e-20 Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILS LPFLNNEKQFER+ TAR GLRTR K Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERTESTARTTGLRTRNK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_POPTR (30S ribosomal protein S18, chloroplastic OS=Populus trichocarpa GN=rps18 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.034e-20 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILS LPFLNNE+QFE++ L AR GLRTRKK Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNERQFEKNELVARTTGLRTRKK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_POPAL (30S ribosomal protein S18, chloroplastic OS=Populus alba GN=rps18 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.034e-20 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILS LPFLNNE+QFE++ L AR GLRTRKK Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNERQFEKNELVARTTGLRTRKK 101
BLAST of CK937869 vs. ExPASy Swiss-Prot
Match: RR18_GOSBA (30S ribosomal protein S18, chloroplastic OS=Gossypium barbadense GN=rps18 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.963e-20 Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 2 Query: 5 QGKILSRRVNRLTLKEQRLITIAIKQARILSLLPFLNNEKQFERSGLTARPPGLRTRKK 181 QGKILSRRVNRLTLK+QRLITIAIKQARILSLLPFLNNEKQFERS T R LRTR K Sbjct: 43 QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTTRTTALRTRNK 101 The following BLAST results are available for this feature:
BLAST of CK937869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937869 ID=CK937869; Name=CK937869; organism=Citrus sinensis; type=EST; length=305bpback to top |