CK937857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.720e-95 Identity = 83/98 (84.69%), Postives = 92/98 (93.88%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK MWKSPNGTIRNILNGTVFREPI+CKN+PRL+PGWTK ICIGRHAFGDQYRATDTVI+G GKLKLVFVPEG+ E+TE EV+NFTGEGGV+L+MY Sbjct: 89 FGLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGQGEETEFEVFNFTGEGGVSLAMY 186 HSP 2 Score: 162.155 bits (409), Expect = 1.720e-95 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 3 Query: 171 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 AFQKIKVANPIVEMDGDEMTRV WKSIKDKLI PFLELDIKY+DLGLP RD TDDKVT+ESAEATLKYNVAIKCATITPDEARVK+ Sbjct: 3 AFQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTIESAEATLKYNVAIKCATITPDEARVKE 88 HSP 3 Score: 47.3654 bits (111), Expect = 1.720e-95 Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTDESIR+FAEASM TA +KKWPLY Sbjct: 187 NTDESIRSFAEASMATALEKKWPLY 211
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_SCHPO (Probable isocitrate dehydrogenase [NADP], mitochondrial OS=Schizosaccharomyces pombe GN=idp1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.871e-68 Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 434 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGK-DEKTELEVYNFTGEGGVALSMY 721 LK+MWKSPNGTIRNILNGTVFREPI+ KN+P+ IPGWT PICIGRHAFGDQY++TD V GPGKL+L F P+G K VY F G GVA+SMY Sbjct: 98 LKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQYKSTDLVASGPGKLELSFTPKGNPSAKETYNVYEFNG-SGVAMSMY 193 HSP 2 Score: 120.939 bits (302), Expect = 4.871e-68 Identity = 53/86 (61.63%), Postives = 73/86 (84.88%), Query Frame = 3 Query: 171 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +FQKI V NP+VEMDGDEMTRV WK I++KL+ P++++ + Y+DLG+ RD T+D++TV++A+A LK +V IKCATITPDEARVK+ Sbjct: 10 SFQKITVKNPVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCATITPDEARVKE 95 HSP 3 Score: 35.8094 bits (81), Expect = 4.871e-68 Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTD+SIR FA +S A QKK PLY Sbjct: 194 NTDDSIRGFAHSSFQMALQKKMPLY 218
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_MACFA (Isocitrate dehydrogenase [NADP], mitochondrial OS=Macaca fascicularis GN=IDH2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.017e-66 Identity = 67/98 (68.37%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V G K+VF P+ E EVYNF GGV + MY Sbjct: 126 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVADRAGTFKMVFTPKDGSGVKEWEVYNFPA-GGVGMGMY 222 HSP 2 Score: 133.65 bits (335), Expect = 2.017e-66 Identity = 60/91 (65.93%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 156 TKKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 T++ A ++IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD TDD+VT++SA AT KY+VA+KCATITPDEARV++ Sbjct: 35 TRRHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSVAVKCATITPDEARVEE 125
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_ASPNG (Isocitrate dehydrogenase [NADP], mitochondrial OS=Aspergillus niger GN=icdA PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.549e-66 Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MW SPNGTIRNIL GTVFREPII +PRL+PGW KPI IGRHAFGDQYRATD VI GPGKL+LV+ P + +T ++VY+F G GG+A + Y Sbjct: 175 FKLKKMWLSPNGTIRNILGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAFGDQYRATDRVIPGPGKLELVYTPVNGEPET-VKVYDFQG-GGIAQTQY 270 HSP 2 Score: 126.716 bits (317), Expect = 2.549e-66 Identity = 56/83 (67.47%), Postives = 72/83 (86.75%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 KIKV NP+VE+DGDEMTR+ W+ I++KLI P+L++D+KY+DLGL RD TDD+VTVE+AEA KY V +KCATITPDEARV++ Sbjct: 92 KIKVKNPVVELDGDEMTRIIWQEIREKLILPYLDVDLKYYDLGLEYRDQTDDQVTVEAAEAIKKYGVGVKCATITPDEARVEE 174 HSP 3 Score: 32.3426 bits (72), Expect = 2.549e-66 Identity = 16/25 (64.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTDESIR FA AS A K PLY Sbjct: 271 NTDESIRGFAHASFQMALLKGLPLY 295
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_HUMAN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Homo sapiens GN=IDH2 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.605e-66 Identity = 67/98 (68.37%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V G K+VF P+ E EVYNF GGV + MY Sbjct: 126 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVADRAGTFKMVFTPKDGSGVKEWEVYNFPA-GGVGMGMY 222 HSP 2 Score: 131.724 bits (330), Expect = 7.605e-66 Identity = 59/90 (65.56%), Postives = 78/90 (86.67%), Query Frame = 3 Query: 159 KKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 ++ A ++IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD TDD+VT++SA AT KY+VA+KCATITPDEARV++ Sbjct: 36 RRHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSVAVKCATITPDEARVEE 125
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_PIG (Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 7.609e-66 Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V+ G K+VF P+ + EVYNF GGV + MY Sbjct: 95 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPA-GGVGMGMY 191 HSP 2 Score: 130.183 bits (326), Expect = 7.609e-66 Identity = 59/86 (68.60%), Postives = 76/86 (88.37%), Query Frame = 3 Query: 171 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 A Q+IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++SA AT KY+VA+KCATITPDEARV++ Sbjct: 9 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEE 94
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_BOVIN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Bos taurus GN=IDH2 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.293e-65 Identity = 67/98 (68.37%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V+ G K+VF P+ E EVYNF GGV + MY Sbjct: 126 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKVVFTPKDGSGPKEWEVYNFPA-GGVGMGMY 222 HSP 2 Score: 129.413 bits (324), Expect = 1.293e-65 Identity = 58/90 (64.44%), Postives = 78/90 (86.67%), Query Frame = 3 Query: 159 KKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 ++ A ++IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++SA AT KY+VA+KCATITPDEARV++ Sbjct: 36 RRHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEE 125
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.072e-65 Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P KT V+NFT GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEISYTPSDGSPKTVYLVHNFTESGGVAMGMY 183 HSP 2 Score: 112.079 bits (279), Expect = 6.072e-65 Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 QKI+ +VEM GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 3 QKIQ-GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 31.187 bits (69), Expect = 6.072e-65 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKNWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHH_YEAST (Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae GN=IDP3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.107e-63 Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPII +PRL+P W KPI IGRHAFGDQYRATD I+ GKL+L F + E +L+VY F GG+A++M+ Sbjct: 86 FNLKEMWKSPNGTIRNILGGTVFREPIIIPKIPRLVPHWEKPIIIGRHAFGDQYRATDIKIKKAGKLRLQFSSDDGKENIDLKVYEFPKSGGIAMAMF 183 HSP 2 Score: 123.635 bits (309), Expect = 1.107e-63 Identity = 56/85 (65.88%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS 434 KIKV +PIVEMDGDE TRV WK IK+KLI P+L++D+KY+DL + RD T+D+VT +S+ ATLKY VA+KCATITPDEAR+K+ + Sbjct: 3 KIKVVHPIVEMDGDEQTRVIWKLIKEKLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSYATLKYGVAVKCATITPDEARMKEFN 87 HSP 3 Score: 29.6462 bits (65), Expect = 1.107e-63 Identity = 12/25 (48.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NT++SI+ FA+AS A ++K PL+ Sbjct: 184 NTNDSIKGFAKASFELALKRKLPLF 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDH1_CANTR (Isocitrate dehydrogenase [NADP], mitochondrial OS=Candida tropicalis GN=IDP1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.440e-63 Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MW SPNGTIRNIL GTVFRE II +PRLIPGW KPI IGRHAFGDQY+ATD VI PG+L+L F P E +VY++TG GV L+MY Sbjct: 112 FHLKKMWLSPNGTIRNILGGTVFRESIIIPCIPRLIPGWEKPIVIGRHAFGDQYKATDLVINEPGRLELRFTPASGGEAQTQKVYDYTGP-GVGLAMY 208 HSP 2 Score: 126.716 bits (317), Expect = 1.440e-63 Identity = 54/83 (65.06%), Postives = 73/83 (87.95%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 KIKV NPIVE+DGDEMTR+ W+ IKD+LI P+L++D+KY+DLG+ +RDATDD++T+++A A +Y V +KCATITPDEARVK+ Sbjct: 29 KIKVKNPIVELDGDEMTRIIWQKIKDQLILPYLDVDLKYYDLGIESRDATDDQITIDAANAIKEYGVGVKCATITPDEARVKE 111 HSP 3 Score: 30.4166 bits (67), Expect = 1.440e-63 Identity = 15/25 (60.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTDESI FA AS A K PLY Sbjct: 209 NTDESITGFAHASFKMALAKGLPLY 233 The following BLAST results are available for this feature:
BLAST of CK937857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937857 ID=CK937857; Name=CK937857; organism=Citrus sinensis; type=EST; length=799bpback to top |