CK937841

Overview
NameCK937841
Unique NameCK937841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.186e-31
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 1
Query:    4 NVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE 252
            ++VLELTYNYGVT+Y KGNAYAQIAIGTDDVYK+AE +K+     GGK+TRE GPLPG+ TKI + LDPDGWK V VDN DFLKELE
Sbjct:  196 SIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282          

HSP 2 Score: 76.6406 bits (187), Expect = 1.030e-13
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1
Query:    4 NVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGW 207
            N V+ELTYNYGV+ YD G  +   AI T DV K  EA++  GG VTREPGP+ G  + I    DPDG+
Sbjct:   67 NFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGY 134          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 9.269e-31
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE 252
            V+ELTYNYGVT+Y KGNAYAQ+AIGT+DVYK+AEA++L     GGK+ R+PGPLPG+NTKI + LDPDGWK V VDN DFLKEL+
Sbjct:  207 VIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291          

HSP 2 Score: 72.0182 bits (175), Expect = 2.536e-12
Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 1
Query:    4 NVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIK-LFGGKVTREPGPLPGINTKITACLDPDGW 207
            N  LELTYNYGV  YD G  +   AI T+DVYK AE IK     K+TREPGP+ G +T I    DPDG+
Sbjct:   74 NFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGY 142          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18
Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN 228
            V+ELTYN+GV DY+KGNAY  IAIG DD+Y T + IK  GG VTREPGP+ G  T I    DPDG+    + N
Sbjct:   57 VIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQN 129          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.299e-16
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1
Query:   13 LELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN 228
            +ELTYN+GV  Y+ G AY  IAIG DD+Y T EA++  GG VTRE GP+ G +T I    DPDG+K  F++N
Sbjct:   55 IELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIEN 126          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.448e-16
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN 228
            V+ELTYN+G T+YD G A+  IAIG DD+Y T +AIK  GG VTRE GP+ G  T I    DPDG+    + N
Sbjct:   57 VIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQN 129          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.294e-13
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 1
Query:    4 NVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWK 210
            N V+ELT+N+G   YD GN +  IA+G +D+Y T + I+  GGKV REPGP+    T I    DPDG+K
Sbjct:   52 NAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYK 120          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD 234
            V+ELTYN+GV  YD GNAY  IA+  D+  +  E I+  GG VTRE GP+ G +T I    DPDG+K   ++  D
Sbjct:   54 VIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD 234
            V+ELTYN+GV  YD GNAY  IA+  D+  +  E I+  GG VTRE GP+ G +T I    DPDG+K   ++  D
Sbjct:   54 VIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD 234
            V+ELTYN+GV  Y+ G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K   ++  D
Sbjct:   54 VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CK937841 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   10 VLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD 234
            V+ELTYN+GV  Y+ G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K   ++  D
Sbjct:   54 VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
The following BLAST results are available for this feature:
BLAST of CK937841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LGUL_BRAOG3.186e-3173.56Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_ORYSJ9.269e-3171.76Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_VIBCH4.039e-1857.53Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_HAEIN1.299e-1654.17Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_VIBPA6.448e-1653.42Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_SYNY32.294e-1349.28Probable lactoylglutathione lyase OS=Synechocystis... [more]
LGUL_SALTY3.912e-1348.00Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI3.912e-1348.00Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_SHIFL5.649e-1245.33Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI5.649e-1245.33Lactoylglutathione lyase OS=Escherichia coli (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D04 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937841 ID=CK937841; Name=CK937841; organism=Citrus sinensis; type=EST; length=598bp
GGGAATGTTGTGCTTGAGTTGACTTACAACTATGGAGTCACTGATTATGA
TAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTTTATA
AAACTGCAGAGGCAATTAAACTTTTTGGTGGGAAAGTTACACGGGAACCT
GGCCCATTACCTGGTATCAACACCAAGATTACTGCATGCTTGGATCCTGA
CGGTTGGAAAACGGTTTTTGTTGATAATGTTGATTTTCTCAAGGAGTTGG
AATGAGTATTGAGTATCATCTTACCCAGCTTATACCACTGAATTCTGAAT
CTGGGCTAAGAAGATTCCTGGAAGAAGTTCCAACTGAGTGTGTATCGAAT
CCCATTTTGTTAATATTGCTATAGTATAGTTCTCCCTGATAATCGCAATA
AAATGTACTTGCTGTTGGCTTTGGGTGCAGTGAGAAGGAAGTTTGAGAAA
TTGATTTGCCTGTTCGTATATTCATTCTTCTCTATTGTTTCAATGGGAAA
TCTTATTCACAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAA
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