CX675376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.313e-87 Identity = 149/225 (66.22%), Postives = 181/225 (80.44%), Query Frame = 1 Query: 4 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 GR+G LD+A+ LI MPM PNAIVWGALL+GCRL K T LAE VL +LIALEPWN+GNYV LSNIYS +W++AA++R MM KG++KI G SW+E++G VHEFL D SHPLS+KIY+KL++L +++ GFVPTT+ V FD+EEEEK+ L HSEKLA+A GLI+T VIR+ KNLRVCGDCHE +KLISKIT REI+VRDNNRFHCF GSCSC D+W Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.672e-68 Identity = 117/226 (51.77%), Postives = 164/226 (72.57%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LGR+G L++AH L+K+MP EP+A +WG LL R+H T+LAE +++ A+EP NSG YVLLSN+Y++S +W D K+R M DKG++K+ G SW+E+ H F VGD HP ++I++ L+EL ++K AG+V T VL D+EEEEK+ + HSE+LA+A+G++ + IR+ KNLRVC DCH AIK +++ITGR II+RDNNRFH F +GSCSC D+W Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.709e-67 Identity = 120/226 (53.10%), Postives = 159/226 (70.35%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LG SG EA E+I M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY+++ +WN+ AK R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+ L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +CHEA KLISKI REII RD RFH F +G CSC D+W Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 2.915e-67 Identity = 119/226 (52.65%), Postives = 163/226 (72.12%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 L R+GQ+ +A+E IKSMPM+PN ++W LL C +H +DLAE Q++ LEP +SG+YVLLSN+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP S+ IY+KL E+ +L++ G+VP +V D+EEEEK+ + HSEK+A+AF LI+T + I + KNLRVC DCH AIKL+SK+ REI+VRD +RFH F GSCSC+D+W Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.973e-67 Identity = 122/225 (54.22%), Postives = 161/225 (71.56%), Query Frame = 1 Query: 4 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 GRSG + EA I SMPMEP+ ++WG+LL+G R+ E L +LI L+P NSG YVLLSN+Y+ + +W + IR M KGI K+ GCS+VEV+GVVHEF+VGD S SE+IY+ LDE+ +L+ AG+V T VL D+ E++K+ L+ HSEKLA+AF L+ T P +RI KNLR+CGDCH +K+ISK+ REI+VRD NRFH F +GSCSC+DFW Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.210e-66 Identity = 111/226 (49.12%), Postives = 155/226 (68.58%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LGR+G L+ A I+ MP+EP A +W ALL CR+HK T+L + + L+P + G +V+L NIY++ +WNDAA++R M + G++K CSWVE++ +H F+ D HP E+I K +E+ K+K G+VP T HV+ ++++E++ L HSEK+ALAF L+ T P I I KN+RVCGDCH AIKL SK+ GREIIVRD NRFH F +G+CSCKD+W Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.378e-66 Identity = 122/227 (53.74%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LGRSG L++A + I++MP+ P+ VWGALL C++H +LAE +L+ LEP N G +VLLSNIY+ KW + +++R M G++K GCS +E+DG++HEFL GDN+HP+SEK+Y KL E+ KLK+ G+ P VL IEEEE K+ L HSEKLA+ +GLI+T VIR+ KNLRVCGDCH KLIS++ REIIVRD RFH F G CSC DFW Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.378e-66 Identity = 120/225 (53.33%), Postives = 155/225 (68.89%), Query Frame = 1 Query: 4 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 GR+G L EA E I+ MP+EP+ + WG+LL+ CR+HK DL + +L+ LEP NSG Y L+N+YSA KW +AAKIR M D ++K +G SW+EV VH F V D +HP +IY + ++ ++K G+VP T VL D+EEE K+ L HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F +G CSC+D+W Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.089e-65 Identity = 121/231 (52.38%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD-----VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LGR+G++ EA+ I+ M MEPN VWGALL CR+H TD+ ++L L P SG YVLLSNIY+ + +W + IR++M KG++K G S VEV+ ++H FLVGD SHP S++IY +LD L K+K G+VP ++ L D+EEE+K+ LA HSEKLA+ F L+ T ++ IRI KNLR+CGDCH A KLIS+IT REII+RD NRFH F G CSC D+W Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
BLAST of CX675376 vs. ExPASy Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.037e-64 Identity = 119/227 (52.42%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 1 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 678 LGRSG L +A+ LIK MPMEP++ VWGALL CR++K T L +L LEP + NYV+LSNIYSAS W DA++IR++M KG+ + GCS++E +H+F+VGD SHP SEKI KL E+ K+K+ G+ T+ VL D+ E+ K+ + HSEK+A+AFGL+ +P + I I KNLR+CGDCHE K IS I R II+RD+ RFH F++GSCSC D+W Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608 The following BLAST results are available for this feature:
BLAST of CX675376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675376 ID=CX675376; Name=CX675376; organism=Citrus sinensis; type=EST; length=713bpback to top |